CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0001779001
(
Gongylonema pulchrum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
GPUH_0001779001
T153690_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0001779001-mRNA-1
C2H2 ZF
235
257
LQCRICMRAFSRSDHLTTHVRTH
GPUH_0001779001-mRNA-1
C2H2 ZF
263
285
FSCDVCGRKFARSDERKRHTKVH
Links
Other
C2H2 ZF
family TFs
Other
Gongylonema pulchrum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOM035432
Anopheles coluzzii
ACOM035432
N
0.821
EGR2
Monodelphis domestica
ENSMODG00000017110
N
0.788
EVEC_0000442401
Enterobius vermicularis
EVEC_0000442401
N
0.803
GF16755
Drosophila ananassae
FBgn0093776
N
0.821
HPBE_0002614201
Heligmosomoides bakeri
HPBE_0002614201
N
0.803
nRc.2.0.1.g36729
Romanomermis culicivorax
nRc.2.0.1.g36729
N
0.816
nRc.2.0.1.g45858
Romanomermis culicivorax
nRc.2.0.1.g45858
N
0.816
Ogr15639
Ophisaurus gracilis
Ogr15639
N
0.782
TELCIR_01564
Teladorsagia circumcincta
TELCIR_01564
N
0.827