CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI02009600
(
Haemonchus contortus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HCOI02009600
T153874_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI02009600.t1
C2H2 ZF
127
149
YKCRFCGLTFNYMNTLRAHERVH
HCOI02009600.t1
C2H2 ZF
155
177
FVCGKCGDSFEFACQLEYHTQQH
HCOI02009600.t2
C2H2 ZF
124
146
YKCRFCGLTFNYMNTLRAHERVH
HCOI02009600.t2
C2H2 ZF
152
174
FVCGKCGDSFEFACQLEYHTQQH
Links
Other
C2H2 ZF
family TFs
Other
Haemonchus contortus
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0001053101
Angiostrongylus cantonensis
ACAC_0001053101
N
0.789
ANCCAN_12795
Ancylostoma caninum
ANCCAN_12795
N
0.803
CBG16732
Caenorhabditis briggsae
CBG16732
N
0.792
CBN25842
Caenorhabditis brenneri
CBN25842
N
0.805
CJA07334
Caenorhabditis japonica
CJA07334
N
0.806
CRE00049
Caenorhabditis remanei
CRE00049
N
0.792
DICVIV_04985
Dictyocaulus viviparus
DICVIV_04985
N
0.808
NBR_0000080601
Nippostrongylus brasiliensis
NBR_0000080601
N
0.817
NECAME_02676
Necator americanus
NECAME_02676
N
0.803
OESDEN_01724
Oesophagostomum dentatum
OESDEN_01724
N
0.803
unc-98
Caenorhabditis elegans
WBGene00006827
N
0.806