CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0001714901
(
Haemonchus placei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HPLM_0001714901
T154286_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0001714901-mRNA-1
C2H2 ZF
125
147
YECEVCHTIFAVKRELSTHMRTH
HPLM_0001714901-mRNA-1
C2H2 ZF
153
175
HTCTQCGKEFGTRQLLKKHWMWH
HPLM_0001714901-mRNA-1
C2H2 ZF
181
203
HVCKHCNKAFFQKGHLTQHLMIH
HPLM_0001714901-mRNA-1
C2H2 ZF
209
231
HQCNLCQKTFIFKFDLNRHMKIH
HPLM_0001714901-mRNA-1
C2H2 ZF
236
257
YSCRQCGRSFTRQQSLDEHALK
Links
Other
C2H2 ZF
family TFs
Other
Haemonchus placei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0001240701
Angiostrongylus costaricensis
ACOC_0001240701
N
0.810
HCOI01865200
Haemonchus contortus
HCOI01865200
N
0.825
HCOI01975500
Haemonchus contortus
HCOI01975500
N
0.825
OESDEN_05153
Oesophagostomum dentatum
OESDEN_05153
N
0.825
TELCIR_13316
Teladorsagia circumcincta
TELCIR_13316
N
0.816