L596_g15116 (Steinernema carpocapsae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 L596_g15116 T154320_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.768 0.754
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.768 0.754
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.768 0.754
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.768 0.754
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.763 0.781
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.763 0.781
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.763 0.781
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.763 0.781
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.763 0.763
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.763 0.763
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.763 0.763
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g15116.t1 C2H2 ZF 236 258
L596_g15116.t1 C2H2 ZF 267 289
L596_g15116.t1 C2H2 ZF 293 315
L596_g15116.t1 C2H2 ZF 321 343
L596_g15116.t1 C2H2 ZF 349 370

Links

Other C2H2 ZF family TFs
Other Steinernema carpocapsae TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R006195 Calypte anna Aan_R006195 I
Afo_R011286 Aptenodytes forsteri Afo_R011286 I
Alligator_sinensis_CCG021131.1 Alligator sinensis Alligator_sinensis_CCG021131.1 I
ENSACAG00000017951 Anolis carolinensis ENSACAG00000017951 I
ENSAMEG00000006061 Ailuropoda melanoleuca ENSAMEG00000006061 I
ENSAMEG00000006086 Ailuropoda melanoleuca ENSAMEG00000006086 I
ENSAMXG00000013978 Astyanax mexicanus ENSAMXG00000013978 I
ENSBTAP00000034715-D1 Bos grunniens ENSBTAP00000034715-D1 I
ENSCPOG00000026466 Cavia porcellus ENSCPOG00000026466 I
ENSCSAG00000003133 Chlorocebus sabaeus ENSCSAG00000003133 I
ENSCSAG00000003196 Chlorocebus sabaeus ENSCSAG00000003196 I
ENSFALG00000000667 Ficedula albicollis ENSFALG00000000667 I
ENSFCAG00000002153 Felis catus ENSFCAG00000002153 I
ENSFCAG00000028112 Felis catus ENSFCAG00000028112 I
ENSGMOG00000014154 Gadus morhua ENSGMOG00000014154 I
ENSGMOG00000015001 Gadus morhua ENSGMOG00000015001 I
ENSLACG00000002646 Latimeria chalumnae ENSLACG00000002646 I
ENSLOCG00000012527 Lepisosteus oculatus ENSLOCG00000012527 I
ENSMEUG00000006640 Macropus eugenii ENSMEUG00000006640 I
ENSMGAG00000003430 Meleagris gallopavo ENSMGAG00000003430 I
ENSMODG00000014816 Monodelphis domestica ENSMODG00000014816 I
ENSMODG00000014836 Monodelphis domestica ENSMODG00000014836 I
ENSMPUG00000010517 Mustela putorius furo ENSMPUG00000010517 I
ENSMPUG00000010528 Mustela putorius furo ENSMPUG00000010528 I
ENSNLEG00000011444 Nomascus leucogenys ENSNLEG00000011444 I
ENSOANG00000006496 Ornithorhynchus anatinus ENSOANG00000006496 I
ENSOARG00000000809 Ovis aries ENSOARG00000000809 I
ENSOARG00000018964 Ovis aries ENSOARG00000018964 I
ENSONIG00000001131 Oreochromis niloticus ENSONIG00000001131 I
ENSP00000293328 Macaca fascicularis ENSP00000293328 I
ENSP00000293328-D1 Bos grunniens ENSP00000293328-D1 I
ENSPANG00000021452 Papio anubis ENSPANG00000021452 I
ENSPANG00000021460 Papio anubis ENSPANG00000021460 I
ENSPFOG00000010905 Poecilia formosa ENSPFOG00000010905 I
ENSPFOG00000012581 Poecilia formosa ENSPFOG00000012581 I
ENSPMAG00000009008 Petromyzon marinus ENSPMAG00000009008 I
ENSPPYG00000008393 Pongo abelii ENSPPYG00000008393 I
ENSPPYG00000008394 Pongo abelii ENSPPYG00000008394 I
ENSSARG00000014205 Sorex araneus ENSSARG00000014205 I
ENSSHAG00000003879 Sarcophilus harrisii ENSSHAG00000003879 I
ENSSTOG00000006691 Ictidomys tridecemlineatus ENSSTOG00000006691 I
ENSSTOG00000006713 Ictidomys tridecemlineatus ENSSTOG00000006713 I
ENSTGUG00000002572 Taeniopygia guttata ENSTGUG00000002572 I
ENSXMAG00000005165 Xiphophorus maculatus ENSXMAG00000005165 I
Gfo_R009045 Geospiza fortis Gfo_R009045 I
Myotis_brandtii_STAT5A_10015329 Myotis brandtii Myotis_brandtii_STAT5A_10015329 I
Myotis_brandtii_STAT5B_10015330 Myotis brandtii Myotis_brandtii_STAT5B_10015330 I
Ogr09155 Ophisaurus gracilis Ogr09155 I
Pvit_13934 Pogona vitticeps Pvit_13934 I
STAT5A Pteropus vampyrus ENSPVAG00000003881 I
Stat5a Rattus norvegicus ENSRNOG00000019496 I
STAT5A Pan troglodytes ENSPTRG00000009199 I
STAT5A Tursiops truncatus ENSTTRG00000007155 I
STAT5A Sus scrofa ENSSSCG00000017402 I
stat5a Takifugu rubripes ENSTRUG00000015454 I
STAT5A Procavia capensis ENSPCAG00000010107 I
stat5a Tetraodon nigroviridis ENSTNIG00000011707 I
STAT5A Ochotona princeps ENSOPRG00000008335 I
STAT5A Loxodonta africana ENSLAFG00000014055 I
stat5a Gasterosteus aculeatus ENSGACG00000008634 I
STAT5A Homo sapiens ENSG00000126561 D
STAT5A Myotis lucifugus ENSMLUG00000026308 I
STAT5A Macaca mulatta ENSMMUG00000010705 I
STAT5A Erinaceus europaeus ENSEEUG00000003642 I
STAT5A Equus caballus ENSECAG00000012328 I
Stat5a Mus musculus ENSMUSG00000004043 D
Stat5a Dipodomys ordii ENSDORG00000000303 I
STAT5A Bos taurus ENSBTAG00000009496 I
stat5a Danio rerio ENSDARG00000019392 I
STAT5A Cavia porcellus ENSCPOG00000012203 I
STAT5A Oryctolagus cuniculus ENSOCUG00000023066 I
STAT5A Otolemur garnettii ENSOGAG00000001513 I
STAT5A Canis familiaris ENSCAFG00000015346 I
stat5a Oryzias latipes ENSORLG00000003961 I
STAT5B Tursiops truncatus ENSTTRG00000006684 I
STAT5B Bos taurus ENSBTAG00000010125 I
STAT5B Canis familiaris ENSCAFG00000015509 I
stat5b Xenopus tropicalis XB-GENE-5913743 I
STAT5B Gallus gallus ENSGALG00000003282 I
Stat5b Rattus norvegicus ENSRNOG00000019075 I
STAT5B Gorilla gorilla ENSGGOG00000008216 I
STAT5B Loxodonta africana ENSLAFG00000014045 I
STAT5B Homo sapiens ENSG00000173757 D
STAT5B Microcebus murinus ENSMICG00000011988 I
STAT5B Myotis lucifugus ENSMLUG00000012050 I
STAT5B Echinops telfairi ENSETEG00000008528 I
STAT5B Equus caballus ENSECAG00000007847 I
Stat5b Mus musculus ENSMUSG00000020919 D
stat5b Danio rerio ENSDARG00000055588 I
STAT5B Oryctolagus cuniculus ENSOCUG00000005078 I
STAT5B Otolemur garnettii ENSOGAG00000017198 I
STAT5B Ochotona princeps ENSOPRG00000008312 I
stat5b Oryzias latipes ENSORLG00000014335 I
STAT5B Pan troglodytes ENSPTRG00000009198 I
STAT5B Sus scrofa ENSSSCG00000017406 I
stat5b.L Xenopus laevis XB-GENE-17341802 I
stat5b.S Xenopus laevis XB-GENE-5913744 I