CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g09950
(
Litomosoides sigmodontis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nLs.2.1.2.g09950
T155369_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t09950-RA
C2H2 ZF
115
138
VTCNLCPKGFASQKLLQQHQHMFH
nLs.2.1.2.t09950-RA
C2H2 ZF
143
165
FICEICGKAFRFRSNLAEHRSVH
Links
Other
C2H2 ZF
family TFs
Other
Litomosoides sigmodontis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB00227.1
Alternaria brassicicola
AB00227.1
N
COCC4DRAFT_126514
Bipolaris maydis
COCC4DRAFT_126514
N
COCCADRAFT_6511
Bipolaris zeicola
COCCADRAFT_6511
N
COCMIDRAFT_95122
Bipolaris oryzae
COCMIDRAFT_95122
N
COCVIDRAFT_112226
Bipolaris victoriae
COCVIDRAFT_112226
N
estExt_fgenesh1_pg.C_10450
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_10450
N
LEMA_P079040.1
Leptosphaeria maculans
LEMA_P079040.1
N
PTRG_09831
Pyrenophora triticirepentis
PTRG_09831
N
PTT_03590
Pyrenophora teres
PTT_03590
N
SETTUDRAFT_25720
Setosphaeria turcica
SETTUDRAFT_25720
N