CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0000973000
(
Parastrongyloides trichosuri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PTRK_0000973000
T155747_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0000973000.1
C2H2 ZF
559
581
YMCNYCDQRFKVQSNLVRHIRSH
PTRK_0000973000.1
C2H2 ZF
587
610
YACKKCGTAYADKKNMDAHVFREH
Links
Other
C2H2 ZF
family TFs
Other
Parastrongyloides trichosuri
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm3808
Brugia malayi
Bm3808
N
0.788
DME_0000439801
Dracunculus medinensis
DME_0000439801
N
0.765
LOAG_03478
Loa loa
LOAG_03478
N
0.765
nAv.1.0.1.g07097
Acanthocheilonema viteae
nAv.1.0.1.g07097
N
0.765
nLs.2.1.2.g00575
Litomosoides sigmodontis
nLs.2.1.2.g00575
N
0.788
nOo.2.0.1.g02280
Onchocerca ochengi
nOo.2.0.1.g02280
N
0.788
RSKR_0000315400
Rhabditophanes kr3021
RSKR_0000315400
N
0.796
SPAL_0001673200
Strongyloides papillosus
SPAL_0001673200
N
0.803
SSTP_0000205000
Strongyloides stercoralis
SSTP_0000205000
N
0.803
SVE_0601000
Strongyloides venezuelensis
SVE_0601000
N
0.803