CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0001238900
(
Parastrongyloides trichosuri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PTRK_0001238900
T155758_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0001238900.1
C2H2 ZF
325
347
HLCHLCNKKYSKVSHLKSHLRAH
PTRK_0001238900.1
C2H2 ZF
353
377
YVCDWPNCPRKFTRSDELQRHRRIH
PTRK_0001238900.1
C2H2 ZF
383
405
FFCNVCGKGFIRSDHKSKHSRVH
Links
Other
C2H2 ZF
family TFs
Other
Parastrongyloides trichosuri
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA009554
Oryza indica
BGIOSGA009554
N
Bostr.18473s0334
Boechera stricta
Bostr.18473s0334
N
BRADI1G03810
Brachypodium distachyon
BRADI1G03810
N
Gorai.009G090200
Gossypium raimondii
Gorai.009G090200
N
GRMZM2G001205
Zea mays
GRMZM2G001205
N
Lus10021509.g
Linum usitatissimum
Lus10021509.g
N
MLOC_29808
Hordeum vulgare
MLOC_29808
N
ONIVA03G40690
Oryza nivara
ONIVA03G40690
N
OPUNC03G36130
Oryza punctata
OPUNC03G36130
N
Sb01g003300
Sorghum bicolor
Sb01g003300
N
TRIUR3_26222
Triticum urartu
TRIUR3_26222
N