CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMRZ_0002185801
(
Schistosoma margrebowiei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMRZ_0002185801
T156311_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0002185801-mRNA-1
C2H2 ZF
8
30
YKCCYCNKAFTASSILRTHIRQH
SMRZ_0002185801-mRNA-1
C2H2 ZF
36
59
FKCKFCWKPFASHAAHDSHVRRTH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma margrebowiei
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_01033
Ancylostoma duodenale
ANCDUO_01033
N
0.805
CGOC_0000814601
Cylicostephanus goldi
CGOC_0000814601
N
0.811
Minc04979
Meloidogyne incognita
Minc04979
N
0.805
OESDEN_20670
Oesophagostomum dentatum
OESDEN_20670
N
0.805
Smp_138420
Schistosoma mansoni
Smp_138420
N
0.827
TELCIR_04914
Teladorsagia circumcincta
TELCIR_04914
N
0.805