CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMTD_0001685401
(
Schistosoma mattheei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMTD_0001685401
T156387_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0001685401-mRNA-1
C2H2 ZF
646
673
FVCLWRECVRGTRPFKAQYMLVVHMRRH
SMTD_0001685401-mRNA-1
C2H2 ZF
679
703
HKCIFEGCTKRYSRLENLKTHLRSH
SMTD_0001685401-mRNA-1
C2H2 ZF
709
734
YQCEIPGCNKAFSNASDRAKHQNRTH
SMTD_0001685401-mRNA-1
C2H2 ZF
740
765
YTCKVDGCSKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma mattheei
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN7_1577
Wickerhamomyces ciferrii
BN7_1577
I
CANTEDRAFT_114327
Candida tenuis
CANTEDRAFT_114327
N
CaO19.7359
Candida albicans
CaO19.7359
N
CD36_85720
Candida dubliniensis
CD36_85720
N
CLUG_04763
Candida lusitaniae
CLUG_04763
N
CORT_0C02060
Candida orthopsilosis
CORT_0C02060
I
CPAG_02889
Candida parapsilosis
CPAG_02889
I
DEHA2A09966g
Debaryomyces hansenii
DEHA2A09966g
N
estExt_fgenesh1_pg.C_chr_2.10766
Pichia stipitis
estExt_fgenesh1_pg.C_chr_2.10766
N
GNLVRS01_PISO0E04118g
Millerozyma farinosa
GNLVRS01_PISO0E04118g
I
GNLVRS01_PISO0F05527g
Millerozyma farinosa
GNLVRS01_PISO0F05527g
I
HPODL_01307
Ogataea parapolymorpha
HPODL_01307
N
KNAG_0H01930
Kazachstania naganishii
KNAG_0H01930
I
KUCA_T00005100001
Kuraishia capsulata
KUCA_T00005100001
N
LALA0_S03e01288g
Lachancea lanzarotensis
LALA0_S03e01288g
I
LELG_02783
Lodderomyces elongisporus
LELG_02783
I
NCAS_0G03730
Naumovozyma castellii
NCAS_0G03730
I
PGUG_01998
Meyerozyma guilliermondii
PGUG_01998
N
PGUG_01998
Candida guilliermondii
PGUG_01998
N
PICST_67047
Scheffersomyces stipitis
PICST_67047
N
Scas_Contig695.2
Saccharomyces castellii
Scas_Contig695.2
I
SPAPADRAFT_51666
Spathaspora passalidarum
SPAPADRAFT_51666
N
YALI0_D01463g
Yarrowia lipolytica
YALI0_D01463g
N