CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-nMf.1.1.scaf18381-processed-gene-0.3
(
Meloidogyne floridensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
snap_masked-nMf.1.1.scaf18381-processed-gene-0.3
T156472_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf18381-processed-gene-0.3-mRNA-1
C2H2 ZF
84
97
YVCERCGIRCKKPS
snap_masked-nMf.1.1.scaf18381-processed-gene-0.3-mRNA-1
C2H2 ZF
106
124
FTCMTCNFSFKTKGNLTKH
Links
Other
C2H2 ZF
family TFs
Other
Meloidogyne floridensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_21361
Ancylostoma duodenale
ANCDUO_21361
N
HCOI01118800
Haemonchus contortus
HCOI01118800
N
NECAME_11065
Necator americanus
NECAME_11065
N