CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0000697901
(
Schistosoma rodhaini
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SROB_0000697901
T156921_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0000697901-mRNA-1
C2H2 ZF
32
54
YICRFCLRQFTKSYNLLIHERTH
SROB_0000697901-mRNA-1
C2H2 ZF
60
82
FPCDVCGKAFRRQDHLRDHRFTH
SROB_0000697901-mRNA-1
C2H2 ZF
88
110
FLCEICGKGFCQSRTLALHRTTH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma rodhaini
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_04337
Schistosoma haematobium
A_04337
N
0.824
csin101762
Clonorchis sinensis
csin101762
N
0.808
ECANG7_06037
Echinococcus canadensis
ECANG7_06037
N
0.768
EmuJ_000193400
Echinococcus multilocularis
EmuJ_000193400
N
0.768
HDID_0000954601
Hymenolepis diminuta
HDID_0000954601
N
0.770
SCUD_0001514801
Schistosoma curassoni
SCUD_0001514801
N
0.824
Sjc_0053270
Schistosoma japonicum
Sjc_0053270
N
0.820
SMRZ_0001156201
Schistosoma margrebowiei
SMRZ_0001156201
N
0.824
SMTD_0000192201
Schistosoma mattheei
SMTD_0000192201
N
0.824
SSLN_0000969901
Schistocephalus solidus
SSLN_0000969901
N
0.791
T265_03639
Opisthorchis viverrini
T265_03639
N
0.808
TASK_0000564101
Taenia asiatica
TASK_0000564101
N
0.764
TsM_000240400
Taenia solium
TsM_000240400
N
0.764
TTAC_0000718901
Hydatigera taeniaeformis
TTAC_0000718901
N
0.768