CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SSTP_0001273800
(
Strongyloides stercoralis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SSTP_0001273800
T157385_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SSTP_0001273800.1
C2H2 ZF
389
411
HICDKCDIQFPSKEYFSRHMAQH
SSTP_0001273800.1
C2H2 ZF
419
441
YQCELCPQKFENEKQLLSHSELH
SSTP_0001273800.1
C2H2 ZF
447
468
FKCDTCQSPFRSNYALRRHKDQ
Links
Other
C2H2 ZF
family TFs
Other
Strongyloides stercoralis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo5g035170
Brassica oleracea
Bo5g035170
I
Bostr.12659s0060
Boechera stricta
Bostr.12659s0060
I
Bra016389
Brassica rapa
Bra016389
I
Bra031364
Brassica rapa
Bra031364
I
Cagra.1707s0011
Capsella grandiflora
Cagra.1707s0011
I
Carubv10009423m.g
Capsella rubella
Carubv10009423m.g
I
TGA3
Arabidopsis thaliana
AT1G22070
D
TGA3
Arabidopsis lyrata
fgenesh2_kg.1__2395__AT1G22070.1
I
Thhalv10007944m.g
Eutrema salsugineum
Thhalv10007944m.g
I