CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_1922800
(
Strongyloides venezuelensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVE_1922800
T157446_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_1922800.1
C2H2 ZF
152
174
HICDICGKAFPYLSILESHRRCH
SVE_1922800.1
C2H2 ZF
180
202
FQCHFCDKKFAQKATLQVHERTH
SVE_1922800.1
C2H2 ZF
208
231
YKCRYCEKTFAQYGTKTVHEKSAH
SVE_1922800.1
C2H2 ZF
237
259
YKCPKCNKSLSSPSALYTHKKTH
SVE_1922800.1
C2H2 ZF
264
287
FQCHLCPKTFTLKNYLKLHVKQVH
SVE_1922800.1
C2H2 ZF
294
316
HVCRFCMKSFSYAGSLQVHVRTH
SVE_1922800.1
C2H2 ZF
322
344
YVCKYCPKAFASQGNLQSHERTH
SVE_1922800.1
C2H2 ZF
350
372
YSCTTCSRSFIQKSQLTAHEATH
SVE_1922800.1
C2H2 ZF
460
482
YICKYCGKKYGYASSLYVHTRLH
SVE_1922800.1
C2H2 ZF
488
510
FQCKYCDKSFTNQGNMQVHQRVH
SVE_1922800.1
C2H2 ZF
516
537
YKCELCGKCYAQKVGLKIHMEQ
Links
Other
C2H2 ZF
family TFs
Other
Strongyloides venezuelensis
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000016422
Astyanax mexicanus
ENSAMXG00000016422
N
ENSONIG00000000152
Oreochromis niloticus
ENSONIG00000000152
N
ENSPFOG00000014002
Poecilia formosa
ENSPFOG00000014002
N
ENSXMAG00000003403
Xiphophorus maculatus
ENSXMAG00000003403
N
zfpm2a
Gasterosteus aculeatus
ENSGACG00000004783
N
zfpm2a
Oryzias latipes
ENSORLG00000003240
N
zfpm2a
Takifugu rubripes
ENSTRUG00000008754
N