CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SVUK_0000048601
(
Strongylus vulgaris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVUK_0000048601
T157447_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0000048601-mRNA-1
C2H2 ZF
48
67
KKFVTVFTQLSHLQQHIRTH
SVUK_0000048601-mRNA-1
C2H2 ZF
73
97
YKCKYTGCEKAFSQLSNLQSHSRCH
Links
Other
C2H2 ZF
family TFs
Other
Strongylus vulgaris
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA014034
Oryza indica
BGIOSGA014034
I
OGLUM04G30580
Oryza glumaepatula
OGLUM04G30580
I
OMERI04G25730
Oryza meridionalis
OMERI04G25730
I
ONIVA04G29890
Oryza nivara
ONIVA04G29890
I
OPUNC04G28220
Oryza punctata
OPUNC04G28220
I
ORGLA04G0270600
Oryza glaberrima
ORGLA04G0270600
I
ORUFI04G32410
Oryza rufipogon
ORUFI04G32410
I
OS04G0691300
Oryza sativa
OS04G0691300
I