SVUK_0000940401 (Strongylus vulgaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SVUK_0000940401 T157473_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0000940401-mRNA-1 C2H2 ZF 131 152
SVUK_0000940401-mRNA-1 C2H2 ZF 163 186
SVUK_0000940401-mRNA-1 C2H2 ZF 192 209
SVUK_0000940401-mRNA-1 C2H2 ZF 254 276
SVUK_0000940401-mRNA-1 C2H2 ZF 282 305

Links

Other C2H2 ZF family TFs
Other Strongylus vulgaris TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_01743 Ancylostoma ceylanicum ANCCEY_01743 N 0.817
BGLB009174 Biomphalaria glabrata BGLB009174 N 0.759
Brh_R010198 Buceros rhinoceros Brh_R010198 N 0.771
CRE14814 Caenorhabditis remanei CRE14814 N 0.789
ENSFALG00000008315 Ficedula albicollis ENSFALG00000008315 N 0.771
ENSGMOG00000016524 Gadus morhua ENSGMOG00000016524 N 0.773
ENSOANG00000022146 Ornithorhynchus anatinus ENSOANG00000022146 N 0.765
ENSTGUG00000011457 Taeniopygia guttata ENSTGUG00000011457 N 0.771
F47E1.3 Caenorhabditis elegans WBGene00018567 N 0.789
HCOI00592400 Haemonchus contortus HCOI00592400 N 0.789
HPLM_0001086701 Haemonchus placei HPLM_0001086701 N 0.789
NBR_0001957501 Nippostrongylus brasiliensis NBR_0001957501 N 0.787
PRDM14 Loxodonta africana ENSLAFG00000015637 N 0.759
prdm14 Takifugu rubripes ENSTRUG00000011758 N 0.773
Pvit_15018 Pogona vitticeps Pvit_15018 N 0.768
SBAD_0000104601 Soboliphyme baturini SBAD_0000104601 N 0.773
SMU15027586 Schmidtea mediterranea SMU15027586 N 0.772
TMUE_s0104004100 Trichuris muris TMUE_s0104004100 N 0.775