TCLT_0000966901 (Thelazia callipaeda)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TCLT_0000966901 T157746_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pat-9
M00620_2.00 		Caenorhabditis elegans
NDKTKTAAHN
NDTTAMAMHN		 PBM
Narasimhan et al.(2015)
pTH10808 		0.786 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TCLT_0000966901-mRNA-1 C2H2 ZF 191 213
TCLT_0000966901-mRNA-1 C2H2 ZF 219 241

Links

Other C2H2 ZF family TFs
Other Thelazia callipaeda TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA034453 Oryza indica BGIOSGA034453 N
LPERR11G10810 Leersia perrieri LPERR11G10810 N
OB11G20720 Oryza brachyantha OB11G20720 N
OBART11G03940 Oryza barthii OBART11G03940 N
OGLUM11G03660 Oryza glumaepatula OGLUM11G03660 N
OLONG_001369 Oryza longistaminata OLONG_001369 N
OLONG_001596 Oryza longistaminata OLONG_001596 N
OMERI11G03590 Oryza meridionalis OMERI11G03590 N
OMERI11G11300 Oryza meridionalis OMERI11G11300 N
ONIVA11G04050 Oryza nivara ONIVA11G04050 N
OPUNC11G03660 Oryza punctata OPUNC11G03660 N
OPUNC11G11410 Oryza punctata OPUNC11G11410 N
ORGLA11G0036700 Oryza glaberrima ORGLA11G0036700 N
ORUFI11G03870 Oryza rufipogon ORUFI11G03870 N
OS11G0160700 Oryza sativa OS11G0160700 N
Sb01g000725 Sorghum bicolor Sb01g000725 N
Si016246m.g Setaria italica Si016246m.g N
Si028825m.g Setaria italica Si028825m.g N
TRAES3BF135900030CFD_g Triticum aestivum TRAES3BF135900030CFD_g N