CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000501301
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0000501301
T157977_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000501301-mRNA-1
C2H2 ZF
267
290
YVCKFCGKIYEIKSSMRYHMKIIH
TRE_0000501301-mRNA-1
C2H2 ZF
300
321
MQCRICGKQFTCVSAVNRHQSK
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin109769
Clonorchis sinensis
csin109769
N
0.817
ECANG7_08792
Echinococcus canadensis
ECANG7_08792
N
0.764
ECPE_0001125701
Echinostoma caproni
ECPE_0001125701
N
0.827
EmuJ_000664200
Echinococcus multilocularis
EmuJ_000664200
N
0.764
HDID_0000408501
Hymenolepis diminuta
HDID_0000408501
N
0.764
HmN_000696200
Hymenolepis microstoma
HmN_000696200
N
0.764
HNAJ_0001250701
Hymenolepis nana
HNAJ_0001250701
N
0.764
MCOS_0000035501
Mesocestoides corti
MCOS_0000035501
N
0.764
SCUD_0002083401
Schistosoma curassoni
SCUD_0002083401
N
0.827
SMRZ_0002373501
Schistosoma margrebowiei
SMRZ_0002373501
N
0.827
SMTD_0000028201
Schistosoma mattheei
SMTD_0000028201
N
0.827
SPER_0002737601
Spirometra erinaceieuropaei
SPER_0002737601
N
0.764
T265_08377
Opisthorchis viverrini
T265_08377
N
0.817
TASK_0000847801
Taenia asiatica
TASK_0000847801
N
0.764
TsM_001129200
Taenia solium
TsM_001129200
N
0.764
TTAC_0000138601
Hydatigera taeniaeformis
TTAC_0000138601
N
0.764