TTRE_0000385401 (Trichuris trichiura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TTRE_0000385401 T158249_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens-2
M06165_2.00 		Drosophila melanogaster
RYAAATCWSDGCAYNC
GNRTGCHSWGATTTRY		 B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632 		0.762 0.775
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTRE_0000385401 C2H2 ZF 135 158
TTRE_0000385401 C2H2 ZF 164 186
TTRE_0000385401 C2H2 ZF 192 214
TTRE_0000385401 C2H2 ZF 220 242
TTRE_0000385401 C2H2 ZF 248 270
TTRE_0000385401 C2H2 ZF 276 299

Links

Other C2H2 ZF family TFs
Other Trichuris trichiura TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
D917_04525 Trichinella nativa D917_04525 N 0.756
D918_06477 Trichuris suis D918_06477 I 0.827
GA16348 Drosophila pseudoobscura FBgn0076363 I 0.762
GE14143 Drosophila yakuba FBgn0231766 I 0.762
GF15430 Drosophila ananassae FBgn0092455 I 0.762
GFI1B Ornithorhynchus anatinus ENSOANG00000014723 I 0.757
GG10437 Drosophila erecta FBgn0102746 I 0.762
GH13715 Drosophila grimshawi FBgn0121191 I 0.762
GI23984 Drosophila mojavensis FBgn0146708 I 0.762
GJ21268 Drosophila virilis FBgn0208401 I 0.762
GK24242 Drosophila willistoni FBgn0226203 I 0.762
GL26188 Drosophila persimilis FBgn0163770 I 0.762
GM16223 Drosophila sechellia FBgn0171139 I 0.762
MDOA011065 Musca domestica MDOA011065 I 0.762
sens-2 Drosophila melanogaster FBgn0051632 D 0.762
tetur16g01570 Tetranychus urticae tetur16g01570 I 0.762
TMUE_s0128002800 Trichuris muris TMUE_s0128002800 I 0.807