CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R008942
(
Geospiza fortis
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
Gfo_R008942
T159450_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R008942
C2HC ZF
328
357
ACPTPGCQGIGHVRGPRYGTHYTLVGCPYS
Links
Other
C2HC ZF
family TFs
Other
Geospiza fortis
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf11440-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf11440-processed-gene-0.0
N
BXY_0600000
Bursaphelenchus xylophilus
BXY_0600000
N
L596_g18998
Steinernema carpocapsae
L596_g18998
N
L889_g16824
Steinernema feltiae
L889_g16824
N
L892_g28062
Steinernema scapterisci
L892_g28062
N
L893_g8502
Steinernema glaseri
L893_g8502
N
MhA1_Contig134.frz3.gene34
Meloidogyne hapla
MhA1_Contig134.frz3.gene34
N
Minc00429
Meloidogyne incognita
Minc00429
N
Minc11430
Meloidogyne incognita
Minc11430
N
PPA24751
Pristionchus pacificus
PPA24751
N
RSKR_0000923100
Rhabditophanes kr3021
RSKR_0000923100
N