estExt_fgenesh2_pg.C_1230027 (Branchiostoma floridae)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 estExt_fgenesh2_pg.C_1230027 T159485_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_1230027 C2HC ZF 738 766
estExt_fgenesh2_pg.C_1230027 C2HC ZF 1329 1357
estExt_fgenesh2_pg.C_1230027 C2HC ZF 1370 1398
estExt_fgenesh2_pg.C_1230027 C2HC ZF 1418 1446
estExt_fgenesh2_pg.C_1230027 C2HC ZF 1497 1525
estExt_fgenesh2_pg.C_1230027 C2HC ZF 1576 1604

Links

Other C2HC ZF family TFs
Other Branchiostoma floridae TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAI70264 Xenopus laevis AAI70264 N 0.753
Cflo_03590--XP_394358.3_APIME Camponotus floridanus Cflo_03590--XP_394358.3_APIME N 0.724
ENSAMEG00000014764 Ailuropoda melanoleuca ENSAMEG00000014764 N 0.764
ENSAMXG00000001873 Astyanax mexicanus ENSAMXG00000001873 N 0.763
ENSAMXG00000002473 Astyanax mexicanus ENSAMXG00000002473 N 0.747
ENSAPLG00000016052 Anas platyrhynchos ENSAPLG00000016052 N 0.764
ENSBTAP00000038860-D1 Bos grunniens ENSBTAP00000038860-D1 N 0.741
ENSLOCG00000017216 Lepisosteus oculatus ENSLOCG00000017216 N 0.769
ENSMMUP00000012198 Macaca fascicularis ENSMMUP00000012198 N 0.764
ENSMPUG00000008741 Mustela putorius furo ENSMPUG00000008741 N 0.747
ENSNLEG00000008466 Nomascus leucogenys ENSNLEG00000008466 N 0.764
ENSNLEG00000010244 Nomascus leucogenys ENSNLEG00000010244 N 0.747
ENSOANG00000009861 Ornithorhynchus anatinus ENSOANG00000009861 N 0.747
ENSONIG00000000499 Oreochromis niloticus ENSONIG00000000499 N 0.734
ENSONIG00000018694 Oreochromis niloticus ENSONIG00000018694 N 0.764
ENSPANG00000005639 Papio anubis ENSPANG00000005639 N 0.747
ENSPFOG00000002613 Poecilia formosa ENSPFOG00000002613 N 0.763
ENSPFOG00000017045 Poecilia formosa ENSPFOG00000017045 N 0.730
ENSPPYG00000012686 Pongo abelii ENSPPYG00000012686 N 0.764
ENSPSIG00000005126 Pelodiscus sinensis ENSPSIG00000005126 N 0.764
ENSSHAG00000015142 Sarcophilus harrisii ENSSHAG00000015142 N 0.741
ENSSTOG00000001345 Ictidomys tridecemlineatus ENSSTOG00000001345 N 0.764
ENSTNIG00000004354 Tetraodon nigroviridis ENSTNIG00000004354 N 0.724
ENSXMAG00000002367 Xiphophorus maculatus ENSXMAG00000002367 N 0.753
GB48919 Apis mellifera GB48919 N 0.730
L798_00492 Zootermopsis nevadensis L798_00492 N 0.730
Myt1 Rattus norvegicus ENSRNOG00000017346 N 0.747
MYT1 Pteropus vampyrus ENSPVAG00000017398 N 0.759
MYT1 Takifugu rubripes ENSTRUG00000002124 N 0.752
MYT1 Anolis carolinensis ENSACAG00000006249 N 0.747
MYT1 Canis familiaris ENSCAFG00000013222 N 0.747
myt1.S Xenopus laevis XB-GENE-1009978 N 0.753
myt1a Oryzias latipes ENSORLG00000020139 N 0.751
myt1b Oryzias latipes ENSORLG00000002252 N 0.736
myt1b Tetraodon nigroviridis ENSTNIG00000003105 N 0.747
MYT1L Felis catus ENSFCAG00000013984 N 0.764
MYT1L Anolis carolinensis ENSACAG00000005667 N 0.764
MYT1L Canis familiaris ENSCAFG00000003240 N 0.764
MYT1L Callithrix jacchus ENSCJAG00000007286 N 0.764
MYT1L Cavia porcellus ENSCPOG00000013246 N 0.741
MYT1L Equus caballus ENSECAG00000014657 N 0.764
MYT1L Tursiops truncatus ENSTTRG00000008589 N 0.741
MYT1L Takifugu rubripes ENSTRUG00000003414 N 0.740
MYT1L Erinaceus europaeus ENSEEUG00000013615 N 0.764
MYT1L Oryctolagus cuniculus ENSOCUG00000016764 N 0.764
MYT1L Homo sapiens ENSG00000186487 I 0.764
MYT1L Sus scrofa ENSSSCG00000029334 N 0.764
MYT1L Sorex araneus ENSSARG00000012319 N 0.764
MYT1L Gorilla gorilla ENSGGOG00000026335 N 0.764
Myt1l Mus musculus ENSMUSG00000061911 N 0.764
Myt1l Rattus norvegicus ENSRNOG00000004269 N 0.782
MYT1L Loxodonta africana ENSLAFG00000002751 N 0.764
MYT1L Procavia capensis ENSPCAG00000015124 N 0.759
MYT1L Pan troglodytes ENSPTRG00000011611 N 0.764
MYT1L Meleagris gallopavo ENSMGAG00000013972 N 0.764
MYT1L Monodelphis domestica ENSMODG00000014378 N 0.764
MYT1L Myotis lucifugus ENSMLUG00000012642 N 0.718
MYT1L Macaca mulatta ENSMMUG00000009310 I 0.764
myt1la Gasterosteus aculeatus ENSGACG00000011952 N 0.753
myt1la Oryzias latipes ENSORLG00000018130 N 0.764
myt1la Danio rerio ENSDARG00000008209 N 0.764
myt1la Takifugu rubripes ENSTRUG00000015790 N 0.764
myt1la Tetraodon nigroviridis ENSTNIG00000010716 N 0.764
Ogr14932 Ophisaurus gracilis Ogr14932 N 0.713
Sakowv30043989m.g Saccoglossus kowalevskii Sakowv30043989m.g N 0.780
ST18 Tetraodon nigroviridis ENSTNIG00000008501 N 0.703
XP_002936343 Xenopus tropicalis XP_002936343 N 0.764
XP_002942428 Xenopus tropicalis XP_002942428 N 0.753