SMU15028607 (Schmidtea mediterranea)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 SMU15028607 T159525_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-11
M00650_2.00 		Caenorhabditis elegans
VAAGTTTN
NAAACTTB		 PBM
Narasimhan et al.(2015)
pTH9925 		0.842 0.842
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15028607 C2HC ZF 74 101
SMU15028607 C2HC ZF 118 146

Links

Other C2HC ZF family TFs
Other Schmidtea mediterranea TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AATE000335 Anopheles atroparvus AATE000335 I 0.807
AATE018011 Anopheles atroparvus AATE018011 I 0.741
ACAC_0000050701 Angiostrongylus cantonensis ACAC_0000050701 I 0.842
ACEP14857 Atta cephalotes ACEP14857 I 0.789
ACOC_0000924001 Angiostrongylus costaricensis ACOC_0000924001 I 0.842
ACOM027979 Anopheles coluzzii ACOM027979 I 0.741
ACYPI31510 Acyrthosiphon pisum ACYPI31510 I 0.825
ACYPI31512 Acyrthosiphon pisum ACYPI31512 I 0.724
ADAC002899 Anopheles darlingi ADAC002899 N 0.706
AFAF001557 Anopheles farauti AFAF001557 I 0.741
AFAF020264 Anopheles farauti AFAF020264 I 0.825
AMAM003778 Anopheles maculatus AMAM003778 I 0.825
AMAM005266 Anopheles maculatus AMAM005266 N 0.706
AMAM009924 Anopheles maculatus AMAM009924 I 0.741
ANCCEY_04739 Ancylostoma ceylanicum ANCCEY_04739 I 0.842
ANCDUO_13968 Ancylostoma duodenale ANCDUO_13968 I 0.842
ASU_06642 Ascaris suum ASU_06642 I 0.842
BXY_0842900 Bursaphelenchus xylophilus BXY_0842900 I 0.807
CapteG130298 Capitella teleta CapteG130298 I 0.811
CBG03854 Caenorhabditis briggsae CBG03854 I 0.842
CBN09920 Caenorhabditis brenneri CBN09920 I 0.842
CBN18838 Caenorhabditis brenneri CBN18838 I 0.842
CG43689 Drosophila melanogaster FBgn0263772 I 0.724
CJA03417 Caenorhabditis japonica CJA03417 I 0.842
Cmyd_10014184 Chelonia mydas Cmyd_10014184 I 0.877
CRE08084 Caenorhabditis remanei CRE08084 I 0.842
DICVIV_01967 Dictyocaulus viviparus DICVIV_01967 I 0.842
ENSAMEG00000015014 Ailuropoda melanoleuca ENSAMEG00000015014 I 0.842
ENSBTAG00000003540 Bos taurus ENSBTAG00000003540 I 0.877
ENSLACG00000008399 Latimeria chalumnae ENSLACG00000008399 I 0.860
ENSTGUG00000014218 Taeniopygia guttata ENSTGUG00000014218 I 0.825
EVEC_0001307101 Enterobius vermicularis EVEC_0001307101 I 0.842
e_gw.598.24.1 Branchiostoma floridae e_gw.598.24.1 I 0.737
GI16394 Drosophila mojavensis FBgn0139142 I 0.724
GL14771 Drosophila persimilis FBgn0152375 I 0.724
Hba_17025 Heterorhabditis bacteriophora Hba_17025 I 0.842
HDID_0000016901 Hymenolepis diminuta HDID_0000016901 N 0.719
HelroG85268 Helobdella robusta HelroG85268 I 0.860
HHAL001110-PA Halyomorpha halys HHAL001110-PA I 0.724
ISCW018799 Ixodes scapularis ISCW018799 I 0.877
L596_g1281 Steinernema carpocapsae L596_g1281 I 0.825
L889_g28085 Steinernema feltiae L889_g28085 I 0.825
L893_g1446 Steinernema glaseri L893_g1446 I 0.825
LCUP002242 Lucilia cuprina LCUP002242 I 0.724
Minc05804 Meloidogyne incognita Minc05804 I 0.772
MYT1L Macaca mulatta ENSMMUG00000009310 I 0.877
MYT1L Homo sapiens ENSG00000186487 I 0.877
NBR_0001165301 Nippostrongylus brasiliensis NBR_0001165301 I 0.842
nDi.2.2.2.g06992 Dirofilaria immitis nDi.2.2.2.g06992 I 0.842
NECAME_10938 Necator americanus NECAME_10938 I 0.842
nLs.2.1.2.g09672 Litomosoides sigmodontis nLs.2.1.2.g09672 I 0.842
nRc.2.0.1.g21954 Romanomermis culicivorax nRc.2.0.1.g21954 N 0.719
Ocbimv22028295m.g Octopus bimaculoides Ocbimv22028295m.g I 0.840
Ocbimv22028296m.g Octopus bimaculoides Ocbimv22028296m.g N 0.707
OESDEN_24201 Oesophagostomum dentatum OESDEN_24201 I 0.842
PTRK_0001788400 Parastrongyloides trichosuri PTRK_0001788400 I 0.825
RSKR_0000214800 Rhabditophanes kr3021 RSKR_0000214800 I 0.825
Smp_168610 Schistosoma mansoni Smp_168610 N 0.772
SMUV_0000666101 Syphacia muris SMUV_0000666101 I 0.842
SPAL_0000489100 Strongyloides papillosus SPAL_0000489100 I 0.807
SPAL_0000892700 Strongyloides papillosus SPAL_0000892700 I 0.825
SSTP_0000574400 Strongyloides stercoralis SSTP_0000574400 I 0.825
ST18 Homo sapiens ENSG00000147488 I 0.842
SVE_1935100 Strongyloides venezuelensis SVE_1935100 I 0.825
SVE_1952800 Strongyloides venezuelensis SVE_1952800 I 0.807
TELCIR_22038 Teladorsagia circumcincta TELCIR_22038 I 0.842
TELCIR_26151 Teladorsagia circumcincta TELCIR_26151 I 0.842
WBGene00238210 Onchocerca volvulus WBGene00238210 I 0.842
YQE_11977 Dendroctonus ponderosae YQE_11977 I 0.741
ztf-11 Caenorhabditis elegans WBGene00009939 D 0.842