CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SROB_0001830201
(
Schistosoma rodhaini
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
SROB_0001830201
T159683_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SROB_0001830201-mRNA-1
C2HC ZF
23
52
GCPTPGCKGYGHIKGPRYFSHQRISGCPYA
Links
Other
C2HC ZF
family TFs
Other
Schistosoma rodhaini
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_01811
Schistosoma haematobium
A_01811
N
1.000
csin100700
Clonorchis sinensis
csin100700
N
0.793
ENSLACG00000022431
Latimeria chalumnae
ENSLACG00000022431
N
0.724
ENSLOCG00000017277
Lepisosteus oculatus
ENSLOCG00000017277
N
0.724
SCUD_0002036501
Schistosoma curassoni
SCUD_0002036501
N
1.000
Sjc_0129040
Schistosoma japonicum
Sjc_0129040
N
1.000
Smp_159100
Schistosoma mansoni
Smp_159100
N
1.000
SMTD_0000035501
Schistosoma mattheei
SMTD_0000035501
N
1.000
SMU15036668
Schmidtea mediterranea
SMU15036668
N
0.759
TRE_0001023901
Trichobilharzia regenti
TRE_0001023901
N
0.897