CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU00392
(
Neurospora crassa
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04218 (CENP-B_N)
IPR006695
NCU00392
T162547_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU00392
M01898_2.00
Neurospora crassa
YGTCACAY
RTGTGACR
PBM
Weirauch et al.(2014)
pTH9311
(Direct)
(Direct)
NCU00392
M01899_2.00
Neurospora crassa
NRTCACNN
NNGTGAYN
PBM
Weirauch et al.(2014)
pTH9658
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01898_2.00
CENPB
51
105
SQPRKTLTDEDRRRMCQYAMDHPTAKQTDIGAQFGVERSTVSKVLRHRDKYLNLE
M01899_2.00
CENPB
52
106
SQPRKTLTDEDRRRMCQYAMDHPTAKQTDIGAQFGVERSTVSKVLRHRDKYLNLE
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU00392
CENPB
138
192
SQPRKTLTDEDRRRMCQYAMDHPTAKQTDIGAQFGVERSTVSKVLRHRDKYLNLE
Links
Other
CENPB
family TFs
Other
Neurospora crassa
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB04375.1
Alternaria brassicicola
AB04375.1
I
0.717
ANIA_04077
Aspergillus nidulans
CADANIAG00004604
I
0.755
ATEG_03075
Aspergillus terreus
CADATEAG00010055
I
0.717
BAUCODRAFT_144230
Baudoinia compniacensis
BAUCODRAFT_144230
I
0.706
Bcin10g03410
Botrytis cinerea
Bcin10g03410
I
0.774
CFIO01_11469
Colletotrichum fioriniae
CFIO01_11469
I
0.736
CGGC5_5606
Colletotrichum gloeosporioides
CGGC5_5606
I
0.755
CH063_07180
Colletotrichum higginsianum
CH063_07180
I
0.731
CHGG_02890
Chaetomium globosum
CHGG_02890
I
0.868
COCC4DRAFT_126547
Bipolaris maydis
COCC4DRAFT_126547
I
0.765
COCCADRAFT_37717
Bipolaris zeicola
COCCADRAFT_37717
I
0.765
COCMIDRAFT_84665
Bipolaris oryzae
COCMIDRAFT_84665
I
0.765
COCSADRAFT_102727
Bipolaris sorokiniana
COCSADRAFT_102727
I
0.765
COCVIDRAFT_34345
Bipolaris victoriae
COCVIDRAFT_34345
I
0.765
CSUB01_07980
Colletotrichum sublineola
CSUB01_07980
I
0.755
CTHT_0024110
Chaetomium thermophilum
CTHT_0024110
I
0.849
DOTSEDRAFT_68166
Dothistroma septosporum
DOTSEDRAFT_68166
I
0.736
EPUS_04985
Endocarpon pusillum
EPUS_04985
I
0.755
estExt_Genewise1.C_50564
Neurospora discreta
estExt_Genewise1.C_50564
I
1.000
EURHEDRAFT_458005
Aspergillus ruber
EURHEDRAFT_458005
I
0.755
e_gw1.00129.236.1
Aspergillus carbonarius
e_gw1.00129.236.1
I
0.736
F503_07914
Ophiostoma piceae uamh
F503_07914
I
0.740
fgenesh1_pg.C_scaffold_1000989
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_1000989
I
0.792
GLRG_03674
Colletotrichum graminicola
GLRG_03674
I
0.736
LEMA_P018010.1
Leptosphaeria maculans
LEMA_P018010.1
I
0.717
MPH_05713
Macrophomina phaseolina
MPH_05713
I
0.725
MYCTH_2304200
Myceliophthora thermophila
MYCTH_2304200
I
0.868
NEUTE1DRAFT_137852
Neurospora tetrasperma
NEUTE1DRAFT_137852
I
1.000
NFIA_019220
Neosartorya fischeri
CADNFIAG00000884
I
0.736
OIDMADRAFT_60194
Oidiodendron maius
OIDMADRAFT_60194
I
0.712
PABG_02907
Paracoccidioides brasiliensis
PABG_02907
I
0.760
PFICI_03782
Pestalotiopsis fici
PFICI_03782
I
0.774
PODANS_7_2090
Podospora anserina
PODANS_7_2090
I
0.868
PTRG_00243
Pyrenophora triticirepentis
PTRG_00243
I
0.736
PTT_13020
Pyrenophora teres
PTT_13020
I
0.736
PV09_02665
Verruconis gallopava
PV09_02665
I
0.736
PVAR5_6448
Byssochlamys spectabilis
PVAR5_6448
I
0.717
SAPIO_CDS5850
Scedosporium apiospermum
SAPIO_CDS5850
I
0.731
SBOR_2000
Sclerotinia borealis
SBOR_2000
I
0.774
SETTUDRAFT_102560
Setosphaeria turcica
SETTUDRAFT_102560
I
0.765
SMAC_08830
Sordaria macrospora
SMAC_08830
I
0.981
SNOG_11811
Phaeosphaeria nodorum
SNOG_11811
I
0.717
SS1G_06977
Sclerotinia sclerotiorum
SS1G_06977
I
0.774
THITE_2119520
Thielavia terrestris
THITE_2119520
I
0.868
UCRNP2_6191
Neofusicoccum parvum
UCRNP2_6191
I
0.725
VDAG_06431
Verticillium dahliae
VDAG_06431
I
0.774
W97_02650
Coniosporium apollinis
W97_02650
I
0.745