CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

AACERI_AaceriAEL295C *(Saccharomycetaceae sp ashbya aceri)* Copper fist
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00649 (Copper-fist)	IPR001083	AACERI_AaceriAEL295C	T163697_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HAA1 M08553_2.00	Saccharomyces cerevisiae	SMGGSG	CSCCKS	Misc DeBoer et al.(2011) YPR008W_1425	0.949	0.949
CUP2 M08549_2.00	Saccharomyces cerevisiae	TCTTTTGCTG	CAGCAAAAGA	Misc DeBoer et al.(2011) YGL166W_48.1	0.718	0.718
CUP2 M08550_2.00	Saccharomyces cerevisiae	TCTTTTTGCTG	CAGCAAAAAGA	Misc DeBoer et al.(2011) YGL166W_48.2	0.718	0.718
CUP2 M08551_2.00	Saccharomyces cerevisiae	TCTTTTTTGCTG	CAGCAAAAAAGA	Misc DeBoer et al.(2011) YGL166W_48.3	0.718	0.718
CUP2 M10408_2.00	Saccharomyces cerevisiae	Transfac license required	Transfac license required	Transfac Matys et al.(2006) F$CUP2_Q4	0.718	0.718
CUP2 M08453_2.00	Saccharomyces cerevisiae	CWTTTYYGCTG	CAGCRRAAAWG	COMPILED Mathelier et al.(2014) MA0287.1	0.718	0.718
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
AGO10193	Copper fist	2	40	VLLNGVKYACERCIRGHRVTTCNHTDQPLMMIKPKGRPS

Links
Other Copper fist family TFs
Other *Saccharomycetaceae sp ashbya aceri* TFs