CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TDEL_0C01350
(
Torulaspora delbrueckii
)
Copper fist
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00649 (Copper-fist)
IPR001083
TDEL_0C01350
T164086_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAA1
M08553_2.00
Saccharomyces cerevisiae
SMGGSG
CSCCKS
Misc
DeBoer et al.(2011)
YPR008W_1425
0.949
0.949
CUP2
M08549_2.00
Saccharomyces cerevisiae
TCTTTTGCTG
CAGCAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.1
0.718
0.718
CUP2
M08550_2.00
Saccharomyces cerevisiae
TCTTTTTGCTG
CAGCAAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.2
0.718
0.718
CUP2
M08551_2.00
Saccharomyces cerevisiae
TCTTTTTTGCTG
CAGCAAAAAAGA
Misc
DeBoer et al.(2011)
YGL166W_48.3
0.718
0.718
CUP2
M10408_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CUP2_Q4
0.718
0.718
CUP2
M08453_2.00
Saccharomyces cerevisiae
CWTTTYYGCTG
CAGCRRAAAWG
COMPILED
Mathelier et al.(2014)
MA0287.1
0.718
0.718
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE91024
Copper fist
2
40
VLINNVKYACERCIRGHRVTTCNHTDQPLMMIKPKGRPS
Links
Other
Copper fist
family TFs
Other
Torulaspora delbrueckii
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
anac095
Arabidopsis thaliana
AT5G41090
N
0.000
AT3G56520
Arabidopsis thaliana
AT3G56520
N
0.000
Bo6g064960
Brassica oleracea
Bo6g064960
N
0.000
Bo6g072200
Brassica oleracea
Bo6g072200
N
0.000
Bo7g030700
Brassica oleracea
Bo7g030700
N
0.000
Bo8g090950
Brassica oleracea
Bo8g090950
N
0.000
Bostr.20505s0102
Boechera stricta
Bostr.20505s0102
N
0.000
Bostr.7200s0128
Boechera stricta
Bostr.7200s0128
N
0.000
Bra003244
Brassica rapa
Bra003244
N
0.000
Bra007254
Brassica rapa
Bra007254
N
0.000
Bra028486
Brassica rapa
Bra028486
N
0.000
Cagra.1914s0015
Capsella grandiflora
Cagra.1914s0015
N
0.000
Carubv10005574m.g
Capsella rubella
Carubv10005574m.g
N
0.000
fgenesh1_pm.C_scaffold_5001708
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001708
N
0.000
scaffold_500654.1
Arabidopsis lyrata
scaffold_500654.1
N
0.000
Thhalv10006451m.g
Eutrema salsugineum
Thhalv10006451m.g
N
0.000
Thhalv10027901m.g
Eutrema salsugineum
Thhalv10027901m.g
N
0.000