ENSAMEG00000011453 (Ailuropoda melanoleuca)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSAMEG00000011453 T164421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LIN28B
M04663_2.00 		Homo sapiens
CGCGRWRDRRCDGCG
CGCHGYYHYWYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX 		1.000 1.000
LIN28B
M04664_2.00 		Homo sapiens
CGCGRTRNNRCDGCG
CGCHGYNNYAYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000012039 CSD 30 102

Links

Other CSD family TFs
Other Ailuropoda melanoleuca TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA032231 Oryza indica BGIOSGA032231 N
BGIOSGA036980 Oryza indica BGIOSGA036980 N
LPERR10G02920 Leersia perrieri LPERR10G02920 N
OBART10G04050 Oryza barthii OBART10G04050 N
OBART11G02970 Oryza barthii OBART11G02970 N
OGLUM10G03910 Oryza glumaepatula OGLUM10G03910 N
OGLUM11G02610 Oryza glumaepatula OGLUM11G02610 N
OLONG_027283 Oryza longistaminata OLONG_027283 N
OMERI11G02750 Oryza meridionalis OMERI11G02750 N
ONIVA05G14200 Oryza nivara ONIVA05G14200 I
ONIVA06G03680 Oryza nivara ONIVA06G03680 N
OPUNC10G03390 Oryza punctata OPUNC10G03390 N
ORGLA11G0027100 Oryza glaberrima ORGLA11G0027100 N
ORUFI11G02830 Oryza rufipogon ORUFI11G02830 N