YBX2 (Homo sapiens)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSG00000006047 T164565_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.970 0.970
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.970 0.970
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.970 0.970
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.970 0.970
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.803 0.803
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000007699 CSD 94 163

Links

Other CSD family TFs
Other Homo sapiens TFs

354 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_08731 Capronia coronata A1O1_08731 I 0.000
A1O3_08120 Capronia epimyces A1O3_08120 I 0.000
A1O5_04644 Cladophialophora psammophila A1O5_04644 I 0.000
A1O7_03252 Cladophialophora yegresii A1O7_03252 I 0.000
A1O9_02495 Exophiala aquamarina A1O9_02495 I 0.000
ACLA_024020 Aspergillus clavatus CADACLAG00001897 I 0.000
ACLA_092100 Aspergillus clavatus CADACLAG00008293 I 0.000
ACRE_015620 Acremonium chrysogenum ACRE_015620 I 0.000
AFUA_1G11620 Aspergillus fumigatus CADAFUAG00007545 I 0.000
ANIA_04558 Aspergillus nidulans CADANIAG00005880 D 0.000
ARB_03466 Arthroderma benhamiae ARB_03466 I 0.000
ATEG_00354 Aspergillus terreus CADATEAG00006864 I 0.000
ATEG_06908 Aspergillus terreus CADATEAG00001478 I 0.000
AUEXF2481DRAFT_64995 Aureobasidium subglaciale AUEXF2481DRAFT_64995 I 0.000
BAUCODRAFT_47223 Baudoinia compniacensis BAUCODRAFT_47223 I 0.000
Bcin03g02160 Botrytis cinerea Bcin03g02160 I 0.000
BDDG_07949 Blastomyces dermatitidis BDDG_07949 I 0.000
CADAFLAG00007216 Aspergillus flavus CADAFLAG00007216 I 0.000
CADANGAG00005978 Aspergillus niger CADANGAG00005978 I 0.000
CADANGAG00006707 Aspergillus niger CADANGAG00006707 I 0.000
CADAORAG00008631 Aspergillus oryzae CADAORAG00008631 I 0.000
CADAORAG00009053 Aspergillus oryzae CADAORAG00009053 I 0.000
CERSUDRAFT_154019 Ceriporiopsis subvermispora CERSUDRAFT_154019 I 0.000
CFIO01_13087 Colletotrichum fioriniae CFIO01_13087 I 0.000
CGGC5_6589 Colletotrichum gloeosporioides CGGC5_6589 I 0.000
CH063_05908 Colletotrichum higginsianum CH063_05908 I 0.000
CHGG_02417 Chaetomium globosum CHGG_02417 I 0.000
CIMG_01795 Coccidioides immitis CIMG_01795 I 0.000
Cob_03112 Colletotrichum orbiculare Cob_03112 I 0.000
COCC4DRAFT_71230 Bipolaris maydis COCC4DRAFT_71230 I 0.000
COCMIDRAFT_102049 Bipolaris oryzae COCMIDRAFT_102049 I 0.000
COCSADRAFT_76883 Bipolaris sorokiniana COCSADRAFT_76883 I 0.000
COCVIDRAFT_37179 Bipolaris victoriae COCVIDRAFT_37179 I 0.000
CPC735_046980 Coccidioides posadasii CPC735_046980 I 0.000
CSUB01_00170 Colletotrichum sublineola CSUB01_00170 I 0.000
DACRYDRAFT_114226 Dacryopinax sp DACRYDRAFT_114226 I 0.000
DICSQDRAFT_139215 Dichomitus squalens DICSQDRAFT_139215 I 0.000
DOTSEDRAFT_67811 Dothistroma septosporum DOTSEDRAFT_67811 I 0.000
DRE_01419 Drechslerella stenobrocha DRE_01419 I 0.000
DRE_02232 Drechslerella stenobrocha DRE_02232 I 0.000
EPUS_08235 Endocarpon pusillum EPUS_08235 I 0.000
estExt_fgenesh3_pm.C_10763 Neurospora discreta estExt_fgenesh3_pm.C_10763 I 0.000
estExt_Genewise1Plus.C_12162 Mycosphaerella fijiensis estExt_Genewise1Plus.C_12162 I 0.000
estExt_Genewise1Plus.C_12924 Cryphonectria parasitica estExt_Genewise1Plus.C_12924 I 0.000
estExt_Genewise1Plus.C_150252 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_150252 I 0.000
EURHEDRAFT_449663 Aspergillus ruber EURHEDRAFT_449663 I 0.000
EURHEDRAFT_500027 Aspergillus ruber EURHEDRAFT_500027 I 0.000
e_gw1.00083.116.1 Aspergillus carbonarius e_gw1.00083.116.1 I 0.000
e_gw1.24.57.1 Nectria haematococca e_gw1.24.57.1 I 0.000
e_gw1.5.103.1 Tremella mesenterica e_gw1.5.103.1 N 0.000
e_gw1.9.538.1 Heterobasidion annosum e_gw1.9.538.1 N 0.000
FFUJ_03061 Fusarium fujikuroi FFUJ_03061 I 0.000
fgenesh1_pg.00009_#_206 Aspergillus carbonarius fgenesh1_pg.00009_#_206 I 0.000
fgenesh1_pg.C_scaffold_4000017 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000017 N 0.000
fgenesh1_pg.sca_133_unmapped000004 Nectria haematococca fgenesh1_pg.sca_133_unmapped000004 I 0.000
fgenesh1_pm.sca_6_chr9_2_0000181 Nectria haematococca fgenesh1_pm.sca_6_chr9_2_0000181 I 0.000
FGRRES_06810 Fusarium graminearum FGRRES_06810 I 0.000
FOMPIDRAFT_1057254 Fomitopsis pinicola FOMPIDRAFT_1057254 I 0.000
FOXG_02014 Fusarium oxysporum FOXG_02014 I 0.000
FPSE_11855 Fusarium pseudograminearum FPSE_11855 I 0.000
FVEG_05176 Fusarium verticillioides FVEG_05176 I 0.000
G647_05131 Cladophialophora carrionii G647_05131 I 0.000
GALMADRAFT_256803 Galerina marginata GALMADRAFT_256803 I 0.000
GGTG_02610 Gaeumannomyces graminis GGTG_02610 I 0.000
GLRG_03129 Colletotrichum graminicola GLRG_03129 I 0.000
GMDG_00261 Pseudogymnoascus destructans GMDG_00261 I 0.000
gw1.4.55.1 Mycosphaerella graminicola gw1.4.55.1 I 0.000
H101_03088 Trichophyton interdigitale H101_03088 I 0.000
H102_08460 Trichophyton rubrum H102_08460 I 0.000
H105_08489 Trichophyton soudanense H105_08489 I 0.000
HCBG_02620 Histoplasma capsulatum HCBG_02620 I 0.000
HETIRDRAFT_235676 Heterobasidion irregulare HETIRDRAFT_235676 N 0.000
HMPREF1120_04639 Exophiala dermatitidis HMPREF1120_04639 I 0.000
JAAARDRAFT_195593 Jaapia argillacea JAAARDRAFT_195593 I 0.000
JL09_g1539 Pichia kudriavzevii JL09_g1539 N 0.000
K437DRAFT_34553 Tilletiaria anomala K437DRAFT_34553 I 0.000
M404DRAFT_1005658 Pisolithus tinctorius M404DRAFT_1005658 I 0.000
M407DRAFT_127560 Tulasnella calospora M407DRAFT_127560 I 0.000
M407DRAFT_16868 Tulasnella calospora M407DRAFT_16868 I 0.000
M407DRAFT_247126 Tulasnella calospora M407DRAFT_247126 I 0.000
M408DRAFT_36178 Serendipita vermifera M408DRAFT_36178 I 0.000
M413DRAFT_120145 Hebeloma cylindrosporum M413DRAFT_120145 I 0.000
M413DRAFT_167868 Hebeloma cylindrosporum M413DRAFT_167868 I 0.000
M413DRAFT_446153 Hebeloma cylindrosporum M413DRAFT_446153 I 0.000
M413DRAFT_446160 Hebeloma cylindrosporum M413DRAFT_446160 I 0.000
M437DRAFT_53287 Aureobasidium melanogenum M437DRAFT_53287 I 0.000
M438DRAFT_335244 Aureobasidium pullulans M438DRAFT_335244 I 0.000
MAJ_04832 Metarhizium majus MAJ_04832 I 0.000
MAM_00511 Metarhizium album MAM_00511 I 0.000
MAPG_09052 Magnaporthe poae MAPG_09052 I 0.000
MBM_08201 Marssonina brunnea MBM_08201 I 0.000
MCYG_03330 Microsporum canis MCYG_03330 I 0.000
MCYG_03330 Arthroderma otae MCYG_03330 I 0.000
MGG_07450 Magnaporthe oryzae MGG_07450 I 0.000
MGU_08463 Metarhizium guizhouense MGU_08463 I 0.000
MGYG_00493 Microsporum gypseum MGYG_00493 I 0.000
Moror_2492 Moniliophthora roreri Moror_2492 I 0.000
Moror_3407 Moniliophthora roreri Moror_3407 I 0.000
MYCFIDRAFT_149027 Pseudocercospora fijiensis MYCFIDRAFT_149027 I 0.000
Mycgr3G10667 Zymoseptoria tritici Mycgr3G10667 I 0.000
NCU01478 Neurospora crassa NCU01478 D 0.000
NechaG55236 Fusarium solani NechaG55236 I 0.000
NechaG89351 Fusarium solani NechaG89351 I 0.000
NechaG96223 Fusarium solani NechaG96223 I 0.000
NEUTE1DRAFT_56998 Neurospora tetrasperma NEUTE1DRAFT_56998 I 0.000
NFIA_013920 Neosartorya fischeri CADNFIAG00001881 I 0.000
OCS_03300 Ophiocordyceps sinensis OCS_03300 I 0.000
OIDMADRAFT_111796 Oidiodendron maius OIDMADRAFT_111796 I 0.000
PAAG_05105 Paracoccidioides sp lutzii PAAG_05105 I 0.000
PABG_04552 Paracoccidioides brasiliensis PABG_04552 I 0.000
Pc13g08420 Penicillium chrysogenum Pc13g08420 I 0.000
Pc18g05390 Penicillium chrysogenum Pc18g05390 I 0.000
PCH_Pc13g08420 Penicillium rubens PCH_Pc13g08420 I 0.000
PCH_Pc18g05390 Penicillium rubens PCH_Pc18g05390 I 0.000
PDE_05378 Penicillium oxalicum PDE_05378 I 0.000
PDE_07240 Penicillium oxalicum PDE_07240 I 0.000
PDIP_30830 Penicillium digitatum PDIP_30830 I 0.000
PDIP_71050 Penicillium digitatum PDIP_71050 I 0.000
PEX1_052050 Penicillium expansum PEX1_052050 I 0.000
PEX1_071460 Penicillium expansum PEX1_071460 I 0.000
PFICI_10867 Pestalotiopsis fici PFICI_10867 I 0.000
PGUG_04028 Candida guilliermondii PGUG_04028 I 0.000
PGUG_04028 Meyerozyma guilliermondii PGUG_04028 I 0.000
PHLGIDRAFT_115686 Phlebiopsis gigantea PHLGIDRAFT_115686 I 0.000
PITC_048580 Penicillium italicum PITC_048580 I 0.000
PITC_092550 Penicillium italicum PITC_092550 I 0.000
PLICRDRAFT_57185 Plicaturopsis crispa PLICRDRAFT_57185 N 0.000
PMAA_044700 Talaromyces marneffei PMAA_044700 I 0.000
PMAA_044700 Penicillium marneffei PMAA_044700 I 0.000
PV04_03432 Capronia semiimmersa PV04_03432 I 0.000
PV05_05939 Exophiala xenobiotica PV05_05939 I 0.000
PV06_00465 Exophiala oligosperma PV06_00465 I 0.000
PV07_06914 Cladophialophora immunda PV07_06914 I 0.000
PV08_04344 Exophiala spinifera PV08_04344 I 0.000
PV10_05946 Exophiala mesophila PV10_05946 I 0.000
PV11_01019 Exophiala sideris PV11_01019 I 0.000
PVAR5_8495 Byssochlamys spectabilis PVAR5_8495 I 0.000
SAKL0C03938g Lachancea kluyveri SAKL0C03938g I 0.000
SAPIO_CDS9713 Scedosporium apiospermum SAPIO_CDS9713 I 0.000
SBOR_6586 Sclerotinia borealis SBOR_6586 I 0.000
SCHCODRAFT_108853 Schizophyllum commune SCHCODRAFT_108853 I 0.000
SEPMUDRAFT_146834 Sphaerulina musiva SEPMUDRAFT_146834 I 0.000
SERLA73DRAFT_65877 Serpula lacrymans SERLA73DRAFT_65877 I 0.000
TEQG_00844 Trichophyton equinum TEQG_00844 I 0.000
TRV_06120 Trichophyton verrucosum TRV_06120 I 0.000
TSTA_033840 Talaromyces stipitatus TSTA_033840 I 0.000
U727_00431305611 Penicillium solitum U727_00431305611 I 0.000
U727_00431323311 Penicillium solitum U727_00431323311 I 0.000
UCRPA7_6910 Togninia minima UCRPA7_6910 I 0.000
UHOR_00180 Ustilago hordei UHOR_00180 I 0.000
UREG_05491 Uncinocarpus reesii UREG_05491 I 0.000
VHEMI01078 Torrubiella hemipterigena VHEMI01078 I 0.000
W97_02786 Coniosporium apollinis W97_02786 I 0.000
X797_009540 Metarhizium robertsii X797_009540 I 0.000
Z517_10598 Fonsecaea pedrosoi Z517_10598 I 0.000
Z518_01229 Rhinocladiella mackenziei Z518_01229 I 0.000
Z519_02471 Cladophialophora bantiana Z519_02471 I 0.000