si:ch1073-284b18.2 (Oryzias latipes)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSORLG00000014369 T164728_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LIN28B
M04663_2.00 		Homo sapiens
CGCGRWRDRRCDGCG
CGCHGYYHYWYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX 		0.879 0.879
LIN28B
M04664_2.00 		Homo sapiens
CGCGRTRNNRCDGCG
CGCHGYNNYAYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX 		0.879 0.879
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000018011 CSD 33 105
ENSORLP00000018015 CSD 32 104

Links

Other CSD family TFs
Other Oryzias latipes TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_007350 Trichomonas vaginalis TVAG_007350 N 0.000
TVAG_009130 Trichomonas vaginalis TVAG_009130 N 0.000
TVAG_029800 Trichomonas vaginalis TVAG_029800 N 0.000
TVAG_039590 Trichomonas vaginalis TVAG_039590 N 0.000
TVAG_072940 Trichomonas vaginalis TVAG_072940 N 0.000
TVAG_114620 Trichomonas vaginalis TVAG_114620 N 0.000
TVAG_125240 Trichomonas vaginalis TVAG_125240 N 0.000
TVAG_129110 Trichomonas vaginalis TVAG_129110 N 0.000
TVAG_129120 Trichomonas vaginalis TVAG_129120 N 0.000
TVAG_132500 Trichomonas vaginalis TVAG_132500 N 0.000
TVAG_132770 Trichomonas vaginalis TVAG_132770 N 0.000
TVAG_132960 Trichomonas vaginalis TVAG_132960 N 0.000
TVAG_159700 Trichomonas vaginalis TVAG_159700 N 0.000
TVAG_160450 Trichomonas vaginalis TVAG_160450 N 0.000
TVAG_161450 Trichomonas vaginalis TVAG_161450 N 0.000
TVAG_164060 Trichomonas vaginalis TVAG_164060 N 0.000
TVAG_164960 Trichomonas vaginalis TVAG_164960 N 0.000
TVAG_204520 Trichomonas vaginalis TVAG_204520 N 0.000
TVAG_205770 Trichomonas vaginalis TVAG_205770 N 0.000
TVAG_208350 Trichomonas vaginalis TVAG_208350 N 0.000
TVAG_222670 Trichomonas vaginalis TVAG_222670 N 0.000
TVAG_232930 Trichomonas vaginalis TVAG_232930 N 0.000
TVAG_262670 Trichomonas vaginalis TVAG_262670 N 0.000
TVAG_282400 Trichomonas vaginalis TVAG_282400 N 0.000
TVAG_286640 Trichomonas vaginalis TVAG_286640 N 0.000
TVAG_298590 Trichomonas vaginalis TVAG_298590 N 0.000
TVAG_298740 Trichomonas vaginalis TVAG_298740 N 0.000
TVAG_301700 Trichomonas vaginalis TVAG_301700 N 0.000
TVAG_313920 Trichomonas vaginalis TVAG_313920 N 0.000
TVAG_323180 Trichomonas vaginalis TVAG_323180 N 0.000
TVAG_345660 Trichomonas vaginalis TVAG_345660 N 0.000
TVAG_345950 Trichomonas vaginalis TVAG_345950 N 0.000
TVAG_353570 Trichomonas vaginalis TVAG_353570 N 0.000
TVAG_357040 Trichomonas vaginalis TVAG_357040 N 0.000
TVAG_372820 Trichomonas vaginalis TVAG_372820 N 0.000
TVAG_384790 Trichomonas vaginalis TVAG_384790 N 0.000
TVAG_388950 Trichomonas vaginalis TVAG_388950 N 0.000
TVAG_415680 Trichomonas vaginalis TVAG_415680 N 0.000
TVAG_439560 Trichomonas vaginalis TVAG_439560 N 0.000
TVAG_453000 Trichomonas vaginalis TVAG_453000 N 0.000
TVAG_488790 Trichomonas vaginalis TVAG_488790 N 0.000
TVAG_504700 Trichomonas vaginalis TVAG_504700 N 0.000
TVAG_506740 Trichomonas vaginalis TVAG_506740 N 0.000
TVAG_509250 Trichomonas vaginalis TVAG_509250 N 0.000
TVAG_515220 Trichomonas vaginalis TVAG_515220 N 0.000
TVAG_520250 Trichomonas vaginalis TVAG_520250 N 0.000
TVAG_528340 Trichomonas vaginalis TVAG_528340 N 0.000
TVAG_547380 Trichomonas vaginalis TVAG_547380 I 0.000
TVAG_550490 Trichomonas vaginalis TVAG_550490 N 0.000
TVAG_552020 Trichomonas vaginalis TVAG_552020 N 0.000
TVAG_568350 Trichomonas vaginalis TVAG_568350 N 0.000
TVAG_574310 Trichomonas vaginalis TVAG_574310 N 0.000
TVAG_574820 Trichomonas vaginalis TVAG_574820 N 0.000
TVAG_579060 Trichomonas vaginalis TVAG_579060 N 0.000
TVAG_581440 Trichomonas vaginalis TVAG_581440 N 0.000
TVAG_582290 Trichomonas vaginalis TVAG_582290 N 0.000
TVAG_582310 Trichomonas vaginalis TVAG_582310 N 0.000