CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSTGUG00000001037
(
Taeniopygia guttata
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00313 (CSD)
IPR002059
ENSTGUG00000001037
T164810_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LIN28B
M04663_2.00
Homo sapiens
CGCGRWRDRRCDGCG
CGCHGYYHYWYCGCG
SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX
0.946
0.946
LIN28B
M04664_2.00
Homo sapiens
CGCGRTRNNRCDGCG
CGCHGYNNYAYCGCG
SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX
0.946
0.946
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000001060
CSD
1
37
QSKLHMEGFRSLKEGEAVEFTFKKSSKGLESIRVTGP
Links
Other
CSD
family TFs
Other
Taeniopygia guttata
TFs
128 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_146880
Trichomonas vaginalis
TVAG_146880
N
TVAG_196950
Trichomonas vaginalis
TVAG_196950
N
TVAG_245700
Trichomonas vaginalis
TVAG_245700
N
TVAG_365790
Trichomonas vaginalis
TVAG_365790
N