YBX2 (Tursiops truncatus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSTTRG00000009780 T164833_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.982 0.982
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.982 0.982
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.982 0.982
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.982 0.982
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.804 0.804
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.768 0.768
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000009273 CSD 96 158

Links

Other CSD family TFs
Other Tursiops truncatus TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG001547.1 Alligator sinensis Alligator_sinensis_CCG001547.1 N
ENSAMEG00000000319 Ailuropoda melanoleuca ENSAMEG00000000319 N
ENSAMXG00000004670 Astyanax mexicanus ENSAMXG00000004670 N
ENSCSAG00000004387 Chlorocebus sabaeus ENSCSAG00000004387 N
ENSECAG00000007605 Equus caballus ENSECAG00000007605 N
ENSGACG00000007639 Gasterosteus aculeatus ENSGACG00000007639 N
ENSGMOG00000000095 Gadus morhua ENSGMOG00000000095 N
ENSLOCG00000004031 Lepisosteus oculatus ENSLOCG00000004031 N
ENSMEUG00000014580 Macropus eugenii ENSMEUG00000014580 N
ENSMPUG00000006206 Mustela putorius furo ENSMPUG00000006206 N
ENSNLEG00000011306 Nomascus leucogenys ENSNLEG00000011306 N
ENSOARG00000004987 Ovis aries ENSOARG00000004987 N
ENSONIG00000002752 Oreochromis niloticus ENSONIG00000002752 N
ENSONIG00000019760 Oreochromis niloticus ENSONIG00000019760 N
ENSORLG00000006471 Oryzias latipes ENSORLG00000006471 N
ENSP00000398837 Macaca fascicularis ENSP00000398837 N
ENSP00000398837-D1 Bos grunniens ENSP00000398837-D1 N
ENSPANG00000007179 Papio anubis ENSPANG00000007179 N
ENSPFOG00000006642 Poecilia formosa ENSPFOG00000006642 N
ENSPFOG00000008123 Poecilia formosa ENSPFOG00000008123 I
ENSPPYG00000009877 Pongo abelii ENSPPYG00000009877 N
ENSSSCG00000002895 Sus scrofa ENSSSCG00000002895 N
ENSSTOG00000027453 Ictidomys tridecemlineatus ENSSTOG00000027453 N
ENSTNIG00000018468 Tetraodon nigroviridis ENSTNIG00000018468 N
ENSTRUG00000013996 Takifugu rubripes ENSTRUG00000013996 N
ENSTRUG00000015234 Takifugu rubripes ENSTRUG00000015234 N
ENSXMAG00000010541 Xiphophorus maculatus ENSXMAG00000010541 N
ENSXMAG00000015008 Xiphophorus maculatus ENSXMAG00000015008 I
KMT2B Pteropus vampyrus ENSPVAG00000012828 N
KMT2B Pan troglodytes ENSPTRG00000010858 N
Kmt2b Rattus norvegicus ENSRNOG00000055525 N
KMT2B Oryctolagus cuniculus ENSOCUG00000012768 N
KMT2B Tupaia belangeri ENSTBEG00000007263 N
KMT2B Tursiops truncatus ENSTTRG00000002243 N
KMT2B Otolemur garnettii ENSOGAG00000004157 N
KMT2B Bos taurus ENSBTAG00000002763 N
KMT2B Canis familiaris ENSCAFG00000006878 N
KMT2B Callithrix jacchus ENSCJAG00000010126 I
KMT2B Cavia porcellus ENSCPOG00000003718 N
KMT2B Dasypus novemcinctus ENSDNOG00000005517 N
Kmt2b Dipodomys ordii ENSDORG00000009061 N
KMT2B Erinaceus europaeus ENSEEUG00000013250 N
KMT2B Felis catus ENSFCAG00000006381 N
KMT2B Homo sapiens ENSG00000272333 N
KMT2B Gorilla gorilla ENSGGOG00000016796 N
KMT2B Microcebus murinus ENSMICG00000009928 N
KMT2B Myotis lucifugus ENSMLUG00000011406 N
KMT2B Macaca mulatta ENSMMUG00000002381 N
KMT2B Monodelphis domestica ENSMODG00000013994 N
Kmt2b Mus musculus ENSMUSG00000006307 N
KMT2B Anolis carolinensis ENSACAG00000016679 N
KMT2B Ochotona princeps ENSOPRG00000001336 N
kmt2bb Danio rerio ENSDARG00000060697 N
Myotis_brandtii_WBP7_10035154 Myotis brandtii Myotis_brandtii_WBP7_10035154 N
Ogr13647 Ophisaurus gracilis Ogr13647 N
Pvit_00563 Pogona vitticeps Pvit_00563 N