Pvit_09294 (Pogona vitticeps)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 Pvit_09294 T165335_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LIN28B
M04663_2.00 		Homo sapiens
CGCGRWRDRRCDGCG
CGCHGYYHYWYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_HT-SELEX 		0.985 0.985
LIN28B
M04664_2.00 		Homo sapiens
CGCGRTRNNRCDGCG
CGCHGYNNYAYCGCG		 SELEX
Yin et al.(2017)
LIN28B_FL_Methyl-HT-SELEX 		0.985 0.985
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_09294 CSD 35 107

Links

Other CSD family TFs
Other Pogona vitticeps TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O5_10088 Cladophialophora psammophila A1O5_10088 N 0.000
BBA_07259 Beauveria bassiana BBA_07259 N 0.000
Bcin10g04400 Botrytis cinerea Bcin10g04400 N 0.000
CFIO01_13194 Colletotrichum fioriniae CFIO01_13194 N 0.000
CGGC5_975 Colletotrichum gloeosporioides CGGC5_975 N 0.000
CH063_12954 Colletotrichum higginsianum CH063_12954 N 0.000
Cob_01758 Colletotrichum orbiculare Cob_01758 N 0.000
CSUB01_05390 Colletotrichum sublineola CSUB01_05390 N 0.000
e_gw1.14.618.1 Nectria haematococca e_gw1.14.618.1 N 0.000
FFUJ_12231 Fusarium fujikuroi FFUJ_12231 N 0.000
FGRRES_01915 Fusarium graminearum FGRRES_01915 N 0.000
FOXG_04220 Fusarium oxysporum FOXG_04220 N 0.000
FOXG_14431 Fusarium oxysporum FOXG_14431 N 0.000
FOXG_15050 Fusarium oxysporum FOXG_15050 N 0.000
FPSE_09133 Fusarium pseudograminearum FPSE_09133 N 0.000
FVEG_07339 Fusarium verticillioides FVEG_07339 N 0.000
GLRG_01306 Colletotrichum graminicola GLRG_01306 N 0.000
GMDG_02112 Pseudogymnoascus destructans GMDG_02112 N 0.000
GSTUM_00009849001 Tuber melanosporum GSTUM_00009849001 N 0.000
HMPREF1120_08485 Exophiala dermatitidis HMPREF1120_08485 N 0.000
MAC_06449 Metarhizium acridum MAC_06449 N 0.000
MAJ_03662 Metarhizium majus MAJ_03662 N 0.000
MBR_07492 Metarhizium brunneum MBR_07492 N 0.000
MGU_03784 Metarhizium guizhouense MGU_03784 N 0.000
NechaG50578 Fusarium solani NechaG50578 N 0.000
OCS_04024 Ophiocordyceps sinensis OCS_04024 N 0.000
OIDMADRAFT_141697 Oidiodendron maius OIDMADRAFT_141697 N 0.000
PODANS_2_2600 Podospora anserina PODANS_2_2600 N 0.000
PV05_05003 Exophiala xenobiotica PV05_05003 N 0.000
SBOR_10075 Sclerotinia borealis SBOR_10075 N 0.000
SNOG_13398 Stagonospora nodorum SNOG_13398 N 0.000
SNOG_13398 Phaeosphaeria nodorum SNOG_13398 N 0.000
SS1G_12488 Sclerotinia sclerotiorum SS1G_12488 N 0.000
V499_07080 Pseudogymnoascus pannorum V499_07080 N 0.000
VDAG_04562 Verticillium dahliae VDAG_04562 N 0.000
VDBG_09326 Verticillium alfalfae VDBG_09326 N 0.000
VDBG_09326 Verticillium albo atrum VDBG_09326 N 0.000
VHEMI10091 Torrubiella hemipterigena VHEMI10091 N 0.000
X797_003404 Metarhizium robertsii X797_003404 N 0.000
YALI0_D21230g Yarrowia lipolytica YALI0_D21230g N 0.000
Z519_04250 Cladophialophora bantiana Z519_04250 N 0.000