CGI_10018383 (Crassostrea gigas)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 CGI_10018383 T166001_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.832 0.832
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.832 0.832
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.832 0.832
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.832 0.832
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.832 0.832
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.832 0.832
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.832 0.832
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.832 0.832
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.832 0.832
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.832 0.832
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.832 0.832
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.832 0.832
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.832 0.832
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.802 0.802
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC28192 CSL 211 341

Links

Other CSL family TFs
Other Crassostrea gigas TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_09080 Capronia epimyces A1O3_09080 I 0.000
AGABI2DRAFT_239429 Agaricus bisporus AGABI2DRAFT_239429 N 0.000
BN946_scf184920.g52 Trametes cinnabarina BN946_scf184920.g52 I 0.000
BOTBODRAFT_93074 Botryobasidium botryosum BOTBODRAFT_93074 N 0.000
CC1G_08635 Coprinopsis cinerea CC1G_08635 N 0.000
CERSUDRAFT_109986 Ceriporiopsis subvermispora CERSUDRAFT_109986 N 0.000
CY34DRAFT_809202 Suillus luteus CY34DRAFT_809202 N 0.000
DACRYDRAFT_24120 Dacryopinax sp DACRYDRAFT_24120 I 0.000
DICSQDRAFT_66188 Dichomitus squalens DICSQDRAFT_66188 I 0.000
fgenesh1_pg.C_scaffold_14000237 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_14000237 N 0.000
FIBRA_01656 Fibroporia radiculosa FIBRA_01656 I 0.000
FOMPIDRAFT_1017957 Fomitopsis pinicola FOMPIDRAFT_1017957 N 0.000
GALMADRAFT_217801 Galerina marginata GALMADRAFT_217801 N 0.000
GLOTRDRAFT_69493 Gloeophyllum trabeum GLOTRDRAFT_69493 I 0.000
GSTUM_00002563001 Tuber melanosporum GSTUM_00002563001 I 0.000
gw1.1.2337.1 Heterobasidion annosum gw1.1.2337.1 N 0.000
HETIRDRAFT_443323 Heterobasidion irregulare HETIRDRAFT_443323 N 0.000
HYDPIDRAFT_161884 Hydnomerulius pinastri HYDPIDRAFT_161884 N 0.000
JAAARDRAFT_60403 Jaapia argillacea JAAARDRAFT_60403 N 0.000
K443DRAFT_677716 Laccaria amethystina K443DRAFT_677716 N 0.000
LACBIDRAFT_242593 Laccaria bicolor LACBIDRAFT_242593 N 0.000
LEMA_P113690.1 Leptosphaeria maculans LEMA_P113690.1 I 0.000
M378DRAFT_66555 Amanita muscaria M378DRAFT_66555 N 0.000
M404DRAFT_43642 Pisolithus tinctorius M404DRAFT_43642 N 0.000
M407DRAFT_78353 Tulasnella calospora M407DRAFT_78353 N 0.000
M408DRAFT_34303 Serendipita vermifera M408DRAFT_34303 N 0.000
M413DRAFT_232462 Hebeloma cylindrosporum M413DRAFT_232462 N 0.000
M422DRAFT_84080 Sphaerobolus stellatus M422DRAFT_84080 N 0.000
Moror_376 Moniliophthora roreri Moror_376 I 0.000
MPER_01714 Moniliophthora perniciosa MPER_01714 I 0.000
PAXRUDRAFT_30646 Paxillus rubicundulus PAXRUDRAFT_30646 N 0.000
PHACADRAFT_246479 Phanerochaete carnosa PHACADRAFT_246479 N 0.000
PHLGIDRAFT_129508 Phlebiopsis gigantea PHLGIDRAFT_129508 N 0.000
PILCRDRAFT_818339 Piloderma croceum PILCRDRAFT_818339 N 0.000
PISMIDRAFT_69441 Pisolithus microcarpus PISMIDRAFT_69441 N 0.000
PISMIDRAFT_70573 Pisolithus microcarpus PISMIDRAFT_70573 N 0.000
PLEOSDRAFT_1111247 Pleurotus ostreatus PLEOSDRAFT_1111247 N 0.000
POSPLDRAFT_93814 Postia placenta POSPLDRAFT_93814 I 0.000
SCHCODRAFT_79748 Schizophyllum commune SCHCODRAFT_79748 N 0.000
SCLCIDRAFT_18203 Scleroderma citrinum SCLCIDRAFT_18203 N 0.000
SERLA73DRAFT_78019 Serpula lacrymans SERLA73DRAFT_78019 N 0.000
SNOG_00166 Phaeosphaeria nodorum SNOG_00166 I 0.000
SNOG_00166 Stagonospora nodorum SNOG_00166 I 0.000
V565_015180 Rhizoctonia solani V565_015180 N 0.000
W97_06787 Coniosporium apollinis W97_06787 I 0.000