Rbpj (Rattus norvegicus)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSRNOG00000046327 T166124_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		1.000 1.000
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		1.000 1.000
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		1.000 1.000
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		1.000 1.000
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		1.000 1.000
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		1.000 1.000
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		1.000 1.000
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		1.000 1.000
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		1.000 1.000
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		1.000 1.000
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		1.000 1.000
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		1.000 1.000
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		1.000 1.000
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.794 0.794
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000065485 CSL 13 143

Links

Other CSL family TFs
Other Rattus norvegicus TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O9_05522 Exophiala aquamarina A1O9_05522 N 0.000
COCC4DRAFT_140449 Bipolaris maydis COCC4DRAFT_140449 N 0.000
COCCADRAFT_22509 Bipolaris zeicola COCCADRAFT_22509 N 0.000
COCMIDRAFT_1602 Bipolaris oryzae COCMIDRAFT_1602 N 0.000
COCSADRAFT_301069 Bipolaris sorokiniana COCSADRAFT_301069 N 0.000
COCVIDRAFT_28385 Bipolaris victoriae COCVIDRAFT_28385 N 0.000
estExt_Genewise1Plus.C_160494 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_160494 N 0.000
e_gw1.40.162.1 Nectria haematococca e_gw1.40.162.1 N 0.000
MAJ_05659 Metarhizium majus MAJ_05659 N 0.000
MGU_07366 Metarhizium guizhouense MGU_07366 N 0.000
NechaG52907 Fusarium solani NechaG52907 N 0.000
OIDMADRAFT_170284 Oidiodendron maius OIDMADRAFT_170284 N 0.000
PTRG_02056 Pyrenophora triticirepentis PTRG_02056 N 0.000
PTT_10087 Pyrenophora teres PTT_10087 N 0.000
SETTUDRAFT_154389 Setosphaeria turcica SETTUDRAFT_154389 N 0.000
SNOG_02690 Stagonospora nodorum SNOG_02690 N 0.000
VHEMI10245 Torrubiella hemipterigena VHEMI10245 N 0.000
Z519_10035 Cladophialophora bantiana Z519_10035 N 0.000