PPA16711 (Pristionchus pacificus)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 PPA16711 T166246_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.714 0.714
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA16711 CSL 220 240

Links

Other CSL family TFs
Other Pristionchus pacificus TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006419 Aedes aegypti AAEL006419 I 0.714
AALB007981 Anopheles albimanus AALB007981 I 0.714
ACOC_0000571401 Angiostrongylus costaricensis ACOC_0000571401 N 0.714
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.714
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.882
Bm4897 Brugia malayi Bm4897 N 0.714
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.714
CJA27924 Caenorhabditis japonica CJA27924 N 0.762
D915_08967 Fasciola hepatica D915_08967 I 0.722
D917_07087 Trichinella nativa D917_07087 N 0.714
DICVIV_03671 Dictyocaulus viviparus DICVIV_03671 N 0.762
EFV61345 Trichinella spiralis EFV61345 N 0.714
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.778
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.714
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.714
GE20814 Drosophila yakuba FBgn0238107 I 0.714
GF14905 Drosophila ananassae FBgn0091930 I 0.714
GG25142 Drosophila erecta FBgn0117267 I 0.714
GH10915 Drosophila grimshawi FBgn0118396 I 0.714
GJ11880 Drosophila virilis FBgn0199134 I 0.714
GL26026 Drosophila persimilis FBgn0163608 I 0.714
GM15894 Drosophila sechellia FBgn0170810 I 0.714
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.765
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.714
NECAME_17145 Necator americanus NECAME_17145 I 0.762
nRc.2.0.1.g21296 Romanomermis culicivorax nRc.2.0.1.g21296 N 0.714
OESDEN_00868 Oesophagostomum dentatum OESDEN_00868 N 0.762
RBPJ Homo sapiens ENSG00000168214 D 0.812
rbpjl Danio rerio ENSDARG00000074148 N 0.714
RPRC014254 Rhodnius prolixus RPRC014254 I 0.714
RSKR_0000739700 Rhabditophanes kr3021 RSKR_0000739700 N 0.714
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I 0.857
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.722
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.722
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.722
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.722
SMUV_0001013801 Syphacia muris SMUV_0001013801 I 0.727
SSTP_0000504800 Strongyloides stercoralis SSTP_0000504800 N 0.714
Su(H) Drosophila melanogaster FBgn0004837 D 0.714
Su(H) Drosophila simulans FBgn0027417 I 0.714
TC014468 Tribolium castaneum TC014468 I 0.714
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.722
WUBG_04020 Wuchereria bancrofti WUBG_04020 N 0.714