Ocbimv22031643m.g (Octopus bimaculoides)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF09271 (LAG1-DNAbind) IPR015351 Ocbimv22031643m.g T166334_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.855 0.855
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.855 0.855
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.855 0.855
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.855 0.855
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.855 0.855
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.855 0.855
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.855 0.855
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.855 0.855
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.855 0.855
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.855 0.855
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.855 0.855
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.855 0.855
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.855 0.855
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.794 0.794
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22031643m.p CSL 262 392
Ocbimv22031644m.p CSL 249 379
Ocbimv22031645m.p CSL 234 364
Ocbimv22031646m.p CSL 221 351
Ocbimv22031647m.p CSL 93 223
Ocbimv22031648m.p CSL 106 236
Ocbimv22031649m.p CSL 148 278

Links

Other CSL family TFs
Other Octopus bimaculoides TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_001730 Trichomonas vaginalis TVAG_001730 N 0.000
TVAG_003790 Trichomonas vaginalis TVAG_003790 N 0.000
TVAG_019620 Trichomonas vaginalis TVAG_019620 N 0.000
TVAG_022050 Trichomonas vaginalis TVAG_022050 N 0.000
TVAG_031630 Trichomonas vaginalis TVAG_031630 N 0.000
TVAG_032260 Trichomonas vaginalis TVAG_032260 N 0.000
TVAG_034300 Trichomonas vaginalis TVAG_034300 N 0.000
TVAG_039590 Trichomonas vaginalis TVAG_039590 N 0.000
TVAG_051900 Trichomonas vaginalis TVAG_051900 N 0.000
TVAG_055380 Trichomonas vaginalis TVAG_055380 N 0.000
TVAG_066150 Trichomonas vaginalis TVAG_066150 N 0.000
TVAG_072810 Trichomonas vaginalis TVAG_072810 N 0.000
TVAG_082490 Trichomonas vaginalis TVAG_082490 N 0.000
TVAG_084000 Trichomonas vaginalis TVAG_084000 N 0.000
TVAG_085170 Trichomonas vaginalis TVAG_085170 N 0.000
TVAG_104610 Trichomonas vaginalis TVAG_104610 N 0.000
TVAG_115140 Trichomonas vaginalis TVAG_115140 N 0.000
TVAG_125900 Trichomonas vaginalis TVAG_125900 N 0.000
TVAG_143010 Trichomonas vaginalis TVAG_143010 N 0.000
TVAG_159700 Trichomonas vaginalis TVAG_159700 N 0.000
TVAG_176590 Trichomonas vaginalis TVAG_176590 N 0.000
TVAG_184700 Trichomonas vaginalis TVAG_184700 N 0.000
TVAG_193570 Trichomonas vaginalis TVAG_193570 N 0.000
TVAG_207030 Trichomonas vaginalis TVAG_207030 N 0.000
TVAG_218470 Trichomonas vaginalis TVAG_218470 N 0.000
TVAG_222670 Trichomonas vaginalis TVAG_222670 N 0.000
TVAG_225500 Trichomonas vaginalis TVAG_225500 N 0.000
TVAG_244290 Trichomonas vaginalis TVAG_244290 N 0.000
TVAG_245670 Trichomonas vaginalis TVAG_245670 N 0.000
TVAG_253230 Trichomonas vaginalis TVAG_253230 N 0.000
TVAG_267240 Trichomonas vaginalis TVAG_267240 N 0.000
TVAG_270150 Trichomonas vaginalis TVAG_270150 N 0.000
TVAG_274450 Trichomonas vaginalis TVAG_274450 N 0.000
TVAG_282400 Trichomonas vaginalis TVAG_282400 N 0.000
TVAG_286640 Trichomonas vaginalis TVAG_286640 N 0.000
TVAG_287170 Trichomonas vaginalis TVAG_287170 N 0.000
TVAG_290290 Trichomonas vaginalis TVAG_290290 N 0.000
TVAG_296430 Trichomonas vaginalis TVAG_296430 N 0.000
TVAG_298740 Trichomonas vaginalis TVAG_298740 N 0.000
TVAG_314210 Trichomonas vaginalis TVAG_314210 N 0.000
TVAG_320900 Trichomonas vaginalis TVAG_320900 N 0.000
TVAG_341960 Trichomonas vaginalis TVAG_341960 N 0.000
TVAG_345660 Trichomonas vaginalis TVAG_345660 N 0.000
TVAG_345950 Trichomonas vaginalis TVAG_345950 N 0.000
TVAG_347580 Trichomonas vaginalis TVAG_347580 N 0.000
TVAG_353570 Trichomonas vaginalis TVAG_353570 N 0.000
TVAG_357040 Trichomonas vaginalis TVAG_357040 N 0.000
TVAG_359360 Trichomonas vaginalis TVAG_359360 N 0.000
TVAG_365130 Trichomonas vaginalis TVAG_365130 N 0.000
TVAG_374420 Trichomonas vaginalis TVAG_374420 N 0.000
TVAG_376980 Trichomonas vaginalis TVAG_376980 N 0.000
TVAG_403490 Trichomonas vaginalis TVAG_403490 N 0.000
TVAG_415210 Trichomonas vaginalis TVAG_415210 N 0.000
TVAG_415680 Trichomonas vaginalis TVAG_415680 N 0.000
TVAG_422330 Trichomonas vaginalis TVAG_422330 N 0.000
TVAG_427180 Trichomonas vaginalis TVAG_427180 N 0.000
TVAG_439560 Trichomonas vaginalis TVAG_439560 N 0.000
TVAG_440640 Trichomonas vaginalis TVAG_440640 N 0.000
TVAG_442490 Trichomonas vaginalis TVAG_442490 N 0.000
TVAG_457930 Trichomonas vaginalis TVAG_457930 N 0.000
TVAG_471970 Trichomonas vaginalis TVAG_471970 N 0.000
TVAG_473020 Trichomonas vaginalis TVAG_473020 N 0.000
TVAG_486380 Trichomonas vaginalis TVAG_486380 N 0.000
TVAG_504700 Trichomonas vaginalis TVAG_504700 N 0.000
TVAG_506740 Trichomonas vaginalis TVAG_506740 N 0.000
TVAG_507340 Trichomonas vaginalis TVAG_507340 N 0.000
TVAG_509260 Trichomonas vaginalis TVAG_509260 N 0.000
TVAG_517530 Trichomonas vaginalis TVAG_517530 N 0.000
TVAG_519610 Trichomonas vaginalis TVAG_519610 N 0.000
TVAG_531390 Trichomonas vaginalis TVAG_531390 N 0.000
TVAG_534630 Trichomonas vaginalis TVAG_534630 N 0.000
TVAG_539860 Trichomonas vaginalis TVAG_539860 N 0.000
TVAG_543030 Trichomonas vaginalis TVAG_543030 N 0.000
TVAG_546520 Trichomonas vaginalis TVAG_546520 N 0.000
TVAG_546580 Trichomonas vaginalis TVAG_546580 N 0.000
TVAG_546620 Trichomonas vaginalis TVAG_546620 N 0.000
TVAG_546680 Trichomonas vaginalis TVAG_546680 N 0.000
TVAG_550050 Trichomonas vaginalis TVAG_550050 N 0.000
TVAG_550550 Trichomonas vaginalis TVAG_550550 N 0.000
TVAG_551700 Trichomonas vaginalis TVAG_551700 N 0.000
TVAG_552020 Trichomonas vaginalis TVAG_552020 N 0.000
TVAG_553880 Trichomonas vaginalis TVAG_553880 N 0.000
TVAG_562210 Trichomonas vaginalis TVAG_562210 N 0.000
TVAG_562780 Trichomonas vaginalis TVAG_562780 N 0.000
TVAG_566130 Trichomonas vaginalis TVAG_566130 N 0.000
TVAG_566860 Trichomonas vaginalis TVAG_566860 N 0.000
TVAG_568350 Trichomonas vaginalis TVAG_568350 N 0.000
TVAG_572200 Trichomonas vaginalis TVAG_572200 N 0.000
TVAG_579950 Trichomonas vaginalis TVAG_579950 N 0.000
TVAG_582290 Trichomonas vaginalis TVAG_582290 N 0.000
TVAG_584820 Trichomonas vaginalis TVAG_584820 N 0.000
TVAG_584920 Trichomonas vaginalis TVAG_584920 N 0.000
TVAG_590230 Trichomonas vaginalis TVAG_590230 N 0.000
TVAG_600430 Trichomonas vaginalis TVAG_600430 N 0.000
TVAG_603130 Trichomonas vaginalis TVAG_603130 N 0.000
TVAG_603880 Trichomonas vaginalis TVAG_603880 N 0.000