ENSSHAG00000018152 (Sarcophilus harrisii)
CUT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02376 (CUT) IPR003350 ENSSHAG00000018152 T166621_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ONECUT1
M02943_2.00 		Homo sapiens
DDTATYGATTTTHN
NDAAAATCRATAHH		 SELEX
Jolma et al.(2013)
ONECUT1_1 		1.000 1.000
ONECUT1
M02944_2.00 		Homo sapiens
DDTATYGATTTTHN
NDAAAATCRATAHH		 SELEX
Jolma et al.(2013)
ONECUT1_2 		1.000 1.000
ONECUT1
M03715_2.00 		Homo sapiens
HRATCGATAHH
DDTATCGATYD		 SELEX
Nitta et al.(2015)
ONECUT1_1 		1.000 1.000
ONECUT1
M04673_2.00 		Homo sapiens
NNATCGATYN
NRATCGATNN		 SELEX
Yin et al.(2017)
ONECUT1_eDBD_HT-SELEX 		1.000 1.000
ONECUT1
M04675_2.00 		Homo sapiens
NNCGATCGATAN
NTATCGATCGNN		 SELEX
Yin et al.(2017)
ONECUT1_FL_HT-SELEX 		1.000 1.000
ONECUT1
M09022_2.00 		Homo sapiens
NBBATTGATYN
NRATCAATVVN		 Misc
Kulakovskiy et al.(2013)
HNF6_HUMAN.H11MO.0.B 		1.000 1.000
Onecut1
M09026_2.00 		Mus musculus
NBBATTGATYN
NRATCAATVVN		 Misc
Kulakovskiy et al.(2013)
HNF6_MOUSE.H11MO.0.A 		1.000 1.000
Onecut1
M09520_2.00 		Mus musculus
NRATCRATMN
NKATYGATYN		 Misc
Heinz et al.(2010)
Liver-Hnf6_ERP000394 		1.000 1.000
ONECUT1
M10418_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF6_Q4 		1.000 1.000
ONECUT1
M10419_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF6_Q6_01 		1.000 1.000
ONECUT1
M04674_2.00 		Homo sapiens
NTATTGATYN
NRATCAATAN		 SELEX
Yin et al.(2017)
ONECUT1_eDBD_Methyl-HT-SELEX 		1.000 1.000
ONECUT1
M04676_2.00 		Homo sapiens
RYSRATCAATAM
KTATTGATYSRY		 SELEX
Yin et al.(2017)
ONECUT1_FL_Methyl-HT-SELEX 		1.000 1.000
ONECUT2
M02942_2.00 		Homo sapiens
DDTATYGATTTTYN
NRAAAATCRATAHH		 SELEX
Jolma et al.(2013)
ONECUT2_1 		0.948 0.948
ONECUT2
M03714_2.00 		Homo sapiens
NDDTATCGATYBNN
NNVRATCGATAHHN		 SELEX
Nitta et al.(2015)
ONECUT2_1 		0.948 0.948
ONECUT2
M04667_2.00 		Homo sapiens
NNATYGATYN
NRATCRATNN		 SELEX
Yin et al.(2017)
ONECUT2_eDBD_HT-SELEX 		0.948 0.948
ONECUT2
M04669_2.00 		Homo sapiens
NNSGATCGATAH
DTATCGATCSNN		 SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_1 		0.948 0.948
ONECUT2
M04670_2.00 		Homo sapiens
NKATYGATYDN
NHRATCRATMN		 SELEX
Yin et al.(2017)
ONECUT2_FL_HT-SELEX_2 		0.948 0.948
ONECUT2
M10417_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OC2_Q3 		0.948 0.948
ONECUT2
M04668_2.00 		Homo sapiens
DTATTGATYN
NRATCAATAH		 SELEX
Yin et al.(2017)
ONECUT2_eDBD_Methyl-HT-SELEX 		0.948 0.948
ONECUT2
M04671_2.00 		Homo sapiens
ACSGATCAATAM
KTATTGATCSGT		 SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_1 		0.948 0.948
ONECUT2
M04672_2.00 		Homo sapiens
DTATTGATTDN
NHAATCAATAH		 SELEX
Yin et al.(2017)
ONECUT2_FL_Methyl-HT-SELEX_2 		0.948 0.948
ONECUT3
M02945_2.00 		Homo sapiens
DWTATYGATTTTYN
NRAAAATCRATAWH		 SELEX
Jolma et al.(2013)
ONECUT3_1 		0.918 0.918
ONECUT3
M04677_2.00 		Homo sapiens
NNATYGATYN
NRATCRATNN		 SELEX
Yin et al.(2017)
ONECUT3_eDBD_HT-SELEX 		0.918 0.918
ONECUT3
M04678_2.00 		Homo sapiens
NTATTGATYN
NRATCAATAN		 SELEX
Yin et al.(2017)
ONECUT3_eDBD_Methyl-HT-SELEX 		0.918 0.918
onecut
M03716_2.00 		Drosophila melanogaster
NNVRATCRATAHNN
NNDTATYGATYBNN		 SELEX
Nitta et al.(2015)
onecut_1 		0.881 0.881
onecut
M03717_2.00 		Drosophila melanogaster
NNTATYGATTWNN
NNWAATCRATANN		 SELEX
Nitta et al.(2015)
onecut_2 		0.881 0.881
onecut
M06472_2.00 		Drosophila melanogaster
HAATCAA
TTGATTD		 B1H
Mathelier et al.(2014)
MA0235.1 		0.881 0.881
ceh-48
M01905_2.00 		Caenorhabditis elegans
NNATYGRNN
NNYCRATNN		 PBM
Weirauch et al.(2014)
pTH8982 		0.813 0.813
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000021419 CUT 136 214
ENSSHAP00000021419 Homeodomain 234 288
ENSSHAP00000021420 CUT 280 358

Links

Other CUT family TFs
Other Sarcophilus harrisii TFs

355 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA005839 Oryza indica BGIOSGA005839 N 0.000
BGIOSGA014504 Oryza indica BGIOSGA014504 N 0.000
BRADI5G19190 Brachypodium distachyon BRADI5G19190 N 0.000
GRMZM2G028438 Zea mays GRMZM2G028438 N 0.000
GRMZM2G109869 Zea mays GRMZM2G109869 N 0.000
GRMZM2G173429 Zea mays GRMZM2G173429 N 0.000
LPERR04G18520 Leersia perrieri LPERR04G18520 N 0.000
MLOC_72117 Hordeum vulgare MLOC_72117 N 0.000
OB02G35300 Oryza brachyantha OB02G35300 N 0.000
OGLUM02G28580 Oryza glumaepatula OGLUM02G28580 N 0.000
OGLUM04G22640 Oryza glumaepatula OGLUM04G22640 N 0.000
OMERI02G27200 Oryza meridionalis OMERI02G27200 N 0.000
OMERI04G19030 Oryza meridionalis OMERI04G19030 N 0.000
ONIVA02G31120 Oryza nivara ONIVA02G31120 N 0.000
ONIVA04G21910 Oryza nivara ONIVA04G21910 N 0.000
OPUNC02G25720 Oryza punctata OPUNC02G25720 N 0.000
ORGLA02G0240700 Oryza glaberrima ORGLA02G0240700 N 0.000
ORGLA04G0197700 Oryza glaberrima ORGLA04G0197700 N 0.000
ORUFI02G29540 Oryza rufipogon ORUFI02G29540 N 0.000
ORUFI04G24440 Oryza rufipogon ORUFI04G24440 N 0.000
OS02G0681900 Oryza sativa OS02G0681900 N 0.000
OS04G0580300 Oryza sativa OS04G0580300 N 0.000
Pavir.Aa00944 Panicum virgatum Pavir.Aa00944 N 0.000
Pavir.Ga00626 Panicum virgatum Pavir.Ga00626 N 0.000
Pavir.J39953 Panicum virgatum Pavir.J39953 N 0.000
Sb04g031770 Sorghum bicolor Sb04g031770 N 0.000
Si009601m.g Setaria italica Si009601m.g N 0.000
Si016627m.g Setaria italica Si016627m.g N 0.000
Traes_2BL_46E59998A1 Triticum aestivum Traes_2BL_46E59998A1 N 0.000