CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ceh-39
(
Caenorhabditis elegans
)
CUT,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02376 (CUT)
PF00046 (Homeobox)
IPR003350
IPR001356
WBGene00000460
T167389_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II and primary sex determination. Located in condensed nuclear chromosome and germ cell nucleus. Is expressed in body wall musculature; germ line; gonad; neurons; and ventral nerve cord. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T26C11.7
CUT
210
288
DDEELDTQLIAHRILDELKEQCIPQASLAVKVLGRSQGTLSDLLRKPKPWGIMKNGRGTFQRMANWLDLDPVVRRALCF
T26C11.7
Homeodomain
318
373
RIRRFTFTQTQLDSLHTVFQQQDRPNREMQQALSATLKLNRSTVGNFFMNARRRLP
Links
Other
CUT,Homeodomain
family TFs
Other
Caenorhabditis elegans
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy