CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIBMGA012843
(
Bombyx mori
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
BGIBMGA012843
T167760_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BGIBMGA012843
M01907_2.00
Bombyx mori
NNCGCGTANVNN
NNBNTACGCGNN
PBM
Weirauch et al.(2014)
pTH9239
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.766
0.766
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01907_2.00
CxxC
51
97
APRRRRTRCKKCEACQRTDCGECVFCHDMVKFGGQGRAKQTCIMRQC
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA012843-TA
CxxC
354
400
APRRRRTRCKKCEACQRTDCGECVFCHDMVKFGGQGRAKQTCIMRQC
Links
Other
CxxC
family TFs
Other
Bombyx mori
TFs
138 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAG00000006261
Chlorocebus sabaeus
ENSCSAG00000006261
I
ENSNLEG00000005137
Nomascus leucogenys
ENSNLEG00000005137
I
ENSP00000292530
Macaca fascicularis
ENSP00000292530
I
ENSPANG00000004913
Papio anubis
ENSPANG00000004913
I
ENSPPYG00000009652
Pongo abelii
ENSPPYG00000009652
I
ENSTSYG00000010668
Tarsius syrichta
ENSTSYG00000010668
I
ZNF333
Otolemur garnettii
ENSOGAG00000028879
I
ZNF333
Tursiops truncatus
ENSTTRG00000012400
I
ZNF333
Tupaia belangeri
ENSTBEG00000002418
I
ZNF333
Sus scrofa
ENSSSCG00000013786
I
ZNF333
Pteropus vampyrus
ENSPVAG00000006967
I
ZNF333
Pan troglodytes
ENSPTRG00000010599
I
ZNF333
Canis familiaris
ENSCAFG00000030256
I
ZNF333
Macaca mulatta
ENSMMUG00000020653
I
ZNF333
Gorilla gorilla
ENSGGOG00000006355
I
ZNF333
Homo sapiens
ENSG00000160961
D
ZNF333
Echinops telfairi
ENSETEG00000018809
I
ZNF333
Dasypus novemcinctus
ENSDNOG00000015877
I
ZNF333
Callithrix jacchus
ENSCJAG00000004543
I