CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KDM2A
(
Myotis lucifugus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSMLUG00000005065
T168081_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.936
0.936
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.809
0.809
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.787
0.787
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.787
0.787
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.745
0.745
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000004620
CxxC
578
624
GARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRMKQSCVLRQC
Links
Other
CxxC
family TFs
Other
Myotis lucifugus
TFs
203 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_12232
Ancylostoma ceylanicum
ANCCEY_12232
N
0.000
ANCDUO_06286
Ancylostoma duodenale
ANCDUO_06286
I
0.000
ASU_08868
Ascaris suum
ASU_08868
I
0.000
Bm3512
Brugia malayi
Bm3512
I
0.000
BTMF_0001011301
Brugia timori
BTMF_0001011301
I
0.000
BXY_1717400
Bursaphelenchus xylophilus
BXY_1717400
I
0.000
CBG11192
Caenorhabditis briggsae
CBG11192
I
0.000
CBN23227
Caenorhabditis brenneri
CBN23227
I
0.000
ceh-38
Caenorhabditis elegans
WBGene00000459
I
0.000
CJA03729
Caenorhabditis japonica
CJA03729
I
0.000
CRE26474
Caenorhabditis remanei
CRE26474
I
0.000
DICVIV_06959
Dictyocaulus viviparus
DICVIV_06959
I
0.000
DME_0000092301
Dracunculus medinensis
DME_0000092301
I
0.000
EEL_0000016301
Elaeophora elaphi
EEL_0000016301
I
0.000
EVEC_0000332701
Enterobius vermicularis
EVEC_0000332701
I
0.000
GPLIN_001052100
Globodera pallida
GPLIN_001052100
I
0.000
HCOI01220000
Haemonchus contortus
HCOI01220000
I
0.000
L596_g1964
Steinernema carpocapsae
L596_g1964
I
0.000
L889_g27415
Steinernema feltiae
L889_g27415
I
0.000
L893_g20975
Steinernema glaseri
L893_g20975
I
0.000
L898_g12845
Steinernema monticolum
L898_g12845
I
0.000
LOAG_08712
Loa loa
LOAG_08712
I
0.000
MhA1_Contig512.frz3.fgene1
Meloidogyne hapla
MhA1_Contig512.frz3.fgene1
I
0.000
Minc16757
Meloidogyne incognita
Minc16757
I
0.000
nAv.1.0.1.g09678
Acanthocheilonema viteae
nAv.1.0.1.g09678
I
0.000
nDi.2.2.2.g00186
Dirofilaria immitis
nDi.2.2.2.g00186
I
0.000
NECAME_06517
Necator americanus
NECAME_06517
N
0.000
nLs.2.1.2.g01435
Litomosoides sigmodontis
nLs.2.1.2.g01435
I
0.000
nOo.2.0.1.g10331
Onchocerca ochengi
nOo.2.0.1.g10331
I
0.000
nRc.2.0.1.g02844
Romanomermis culicivorax
nRc.2.0.1.g02844
N
0.000
RSKR_0000794200
Rhabditophanes kr3021
RSKR_0000794200
N
0.000
scaffold421-EXSNAP2012.16
Pristionchus exspectatus
scaffold421-EXSNAP2012.16
I
0.000
SMUV_0000999101
Syphacia muris
SMUV_0000999101
I
0.000
TCLT_0000779601
Thelazia callipaeda
TCLT_0000779601
I
0.000
WBGene00247461
Onchocerca volvulus
WBGene00247461
I
0.000
WUBG_00613
Wuchereria bancrofti
WUBG_00613
N
0.000