CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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kdm2aa
(
Tetraodon nigroviridis
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSTNIG00000003239
T168354_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.957
0.957
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.702
0.702
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000000534
CxxC
505
551
VLRRRRVRCKRCEACVRSECGDCNFCRDMKKFGGPGKLKQTCVLRQC
ENSTNIP00000005821
CxxC
488
534
VLRRRRVRCKRCEACVRSECGDCNFCRDMKKFGGPGKLKQTCVLRQC
Links
Other
CxxC
family TFs
Other
Tetraodon nigroviridis
TFs
161 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP14936
Atta cephalotes
ACEP14936
N
ACYPI001635
Acyrthosiphon pisum
ACYPI001635
N
Alligator_sinensis_CCG000862.1
Alligator sinensis
Alligator_sinensis_CCG000862.1
N
BGLB001139
Biomphalaria glabrata
BGLB001139
N
Cflo_02462--XP_391937.2_APIME
Camponotus floridanus
Cflo_02462--XP_391937.2_APIME
N
CGI_10014877
Crassostrea gigas
CGI_10014877
N
CLEC007310
Cimex lectularius
CLEC007310
N
Cmyd_10005570
Chelonia mydas
Cmyd_10005570
N
DAPPUDRAFT_59022
Daphnia pulex
DAPPUDRAFT_59022
N
ENSAMXG00000020327
Astyanax mexicanus
ENSAMXG00000020327
N
ENSCSAG00000003006
Chlorocebus sabaeus
ENSCSAG00000003006
N
ENSGMOG00000016149
Gadus morhua
ENSGMOG00000016149
N
ENSLOCG00000009512
Lepisosteus oculatus
ENSLOCG00000009512
N
ENSLOCG00000014899
Lepisosteus oculatus
ENSLOCG00000014899
N
ENSMEUG00000000606
Macropus eugenii
ENSMEUG00000000606
N
ENSMGAG00000016559
Meleagris gallopavo
ENSMGAG00000016559
N
ENSMPUG00000005118
Mustela putorius furo
ENSMPUG00000005118
N
ENSNLEG00000002946
Nomascus leucogenys
ENSNLEG00000002946
N
ENSOARG00000010869
Ovis aries
ENSOARG00000010869
N
ENSORLG00000006931
Oryzias latipes
ENSORLG00000006931
N
ENSP00000405290
Macaca fascicularis
ENSP00000405290
N
ENSPANG00000014704
Papio anubis
ENSPANG00000014704
N
ENSPCAG00000000784
Procavia capensis
ENSPCAG00000000784
N
ENSPFOG00000008940
Poecilia formosa
ENSPFOG00000008940
N
ENSPMAG00000007632
Petromyzon marinus
ENSPMAG00000007632
N
ENSPPYG00000010165
Pongo abelii
ENSPPYG00000010165
N
ENSSARG00000014127
Sorex araneus
ENSSARG00000014127
N
ENSSTOG00000003396
Ictidomys tridecemlineatus
ENSSTOG00000003396
N
ENSXMAG00000004213
Xiphophorus maculatus
ENSXMAG00000004213
N
GA19928
Drosophila pseudoobscura
FBgn0079924
N
GD25707
Drosophila simulans
FBgn0196992
N
GE21022
Drosophila yakuba
FBgn0238304
N
GF24890
Drosophila ananassae
FBgn0101882
N
GG14662
Drosophila erecta
FBgn0106918
N
GH15456
Drosophila grimshawi
FBgn0122928
N
GH23748
Drosophila grimshawi
FBgn0131205
N
GI16736
Drosophila mojavensis
FBgn0139484
N
GJ12482
Drosophila virilis
FBgn0199724
N
GK20151
Drosophila willistoni
FBgn0222148
N
gw.84.113.1
Branchiostoma floridae
gw.84.113.1
N
HelroG63031
Helobdella robusta
HelroG63031
N
Hsal_10736--XP_391937.2_APIME
Harpegnathos saltator
Hsal_10736--XP_391937.2_APIME
N
ISCW018625
Ixodes scapularis
ISCW018625
N
L798_01241
Zootermopsis nevadensis
L798_01241
N
LCUP010821
Lucilia cuprina
LCUP010821
N
LDEC011477
Leptinotarsa decemlineata
LDEC011477
N
LotgiG127403
Lottia gigantea
LotgiG127403
N
MCINX015160
Melitaea cinxia
MCINX015160
N
MDOA009035
Musca domestica
MDOA009035
N
NPAS1
Sus scrofa
ENSSSCG00000003108
N
NPAS1
Tursiops truncatus
ENSTTRG00000011416
N
NPAS1
Callithrix jacchus
ENSCJAG00000011666
N
NPAS1
Cavia porcellus
ENSCPOG00000023069
N
npas1
Danio rerio
ENSDARG00000015876
N
NPAS1
Dasypus novemcinctus
ENSDNOG00000035321
N
NPAS1
Felis catus
ENSFCAG00000004833
N
NPAS1
Homo sapiens
ENSG00000130751
N
npas1
Gasterosteus aculeatus
ENSGACG00000009494
N
NPAS1
Microcebus murinus
ENSMICG00000006346
N
NPAS1
Macaca mulatta
ENSMMUG00000011330
N
NPAS1
Canis familiaris
ENSCAFG00000032405
N
NPAS1
Monodelphis domestica
ENSMODG00000009053
N
Npas1
Mus musculus
ENSMUSG00000001988
N
NPAS1
Otolemur garnettii
ENSOGAG00000012829
N
NPAS1
Ochotona princeps
ENSOPRG00000014860
N
NPAS1
Bos taurus
ENSBTAG00000015576
N
NPAS1
Pan troglodytes
ENSPTRG00000011199
N
Npas1
Rattus norvegicus
ENSRNOG00000015376
N
npas1
Takifugu rubripes
ENSTRUG00000012318
N
NPAS3
Oryzias latipes
ENSORLG00000018065
N
NV13641
Nasonia vitripennis
NV13641
N
Ocbimv22029779m.g
Octopus bimaculoides
Ocbimv22029779m.g
N
PHUM613040
Pediculus humanus
PHUM613040
N
SMAR015279
Strigamia maritima
SMAR015279
N
SPER_0003947801
Spirometra erinaceieuropaei
SPER_0003947801
N
TC001448
Tribolium castaneum
TC001448
N
trh
Drosophila melanogaster
FBgn0262139
N
trh
Drosophila sechellia
FBgn0025046
N