CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI02160700
(
Haemonchus contortus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02008 (zf-CXXC)
IPR002857
HCOI02160700
T168806_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y75B8A.6
M00652_2.00
Caenorhabditis elegans
NHKCGGD
HCCGMDN
PBM
Narasimhan et al.(2015)
pTH10798
0.871
0.871
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI02160700.t1
CxxC
38
84
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
HCOI02160700.t1
CxxC
98
143
TFKARVGCNQCEDCRMPDCQICLVCLDKRFFDNRYMTGAMCAKKRC
HCOI02160700.t2
CxxC
38
84
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
HCOI02160700.t2
CxxC
98
143
TFKARVGCNQCEDCRMPDCQICLVCLDKRFFDNRYMTGAMCAKKRC
HCOI02160700.t3
CxxC
38
84
SSMNRSQRCGVCRGCQCKPCGQCTYCQDSPQFGGPGVKKQSCIERRC
HCOI02160700.t3
CxxC
98
143
TFKARVGCNQCEDCRMPDCQICLVCLDKRFFDNRYMTGAMCAKKRC
Links
Other
CxxC
family TFs
Other
Haemonchus contortus
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN06186
Caenorhabditis brenneri
CBN06186
N
CBN12448
Caenorhabditis brenneri
CBN12448
N
CBN21917
Caenorhabditis brenneri
CBN21917
N