CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE05176
(
Caenorhabditis remanei
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00751 (DM)
IPR001275
CRE05176
T168935_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mab-3
M00653_2.00
Caenorhabditis elegans
NWTGTTGCRN
NYGCAACAWN
PBM
Narasimhan et al.(2015)
pTH8998
0.949
0.903
mab-3
M07546_2.00
Caenorhabditis elegans
AATGTTGCSWWNT
ANWWSGCAACATT
EMSA
Mathelier et al.(2014)
MA0262.1
0.949
0.903
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE05176
DM
24
69
KNYYCQRCLNHGEYKPRKGHKPDCRYLQCPCAECTMVERRRQLNNM
CRE05176
DM
90
137
RDPHCARCSAHGVLVPLRGHKRTMCQFVTCTCTLCALVENRRMLMAAQ
Links
Other
DM
family TFs
Other
Caenorhabditis remanei
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_03269
Aspergillus nidulans
CADANIAG00009791
N
CPC735_021240
Coccidioides posadasii
CPC735_021240
N
PVAR5_4982
Byssochlamys spectabilis
PVAR5_4982
N