CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

DMRTC2 *(Cavia porcellus)* DM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00751 (DM)	IPR001275	ENSCPOG00000001805	T169001_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
DMRTC2 M01926_2.00	Cavia porcellus	NNHDWNDN	NHNWHDNN	PBM Weirauch et al.(2014) pTH9250	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Dmrtc2 M00789_2.00	Mus musculus	NNNATGTATHMNN	NNKDATACATNNN	PBM Weirauch et al.(2013) pTH3205	0.961	0.979
DMRTC2 M04685_2.00	Homo sapiens	TGTAWCRTTB	VAAYGWTACA	SELEX Yin et al.(2017) DMRTC2_eDBD_HT-SELEX_1	0.961	0.979
DMRTC2 M04686_2.00	Homo sapiens	NWTGTADCAAWW	WWTTGHTACAWN	SELEX Yin et al.(2017) DMRTC2_eDBD_HT-SELEX_2	0.961	0.979
DMRTC2 M04688_2.00	Homo sapiens	TGTATCGTTC	GAACGATACA	SELEX Yin et al.(2017) DMRTC2_FL_HT-SELEX_1	0.961	0.979
DMRTC2 M04689_2.00	Homo sapiens	NDTGTRKCAAWH	DWTTGMYACAHN	SELEX Yin et al.(2017) DMRTC2_FL_HT-SELEX_2	0.961	0.979
DMRTC2 M10432_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DMRT7_01	0.961	0.979
DMRTC2 M04687_2.00	Homo sapiens	NATGTAKCRAWW	WWTYGMTACATN	SELEX Yin et al.(2017) DMRTC2_eDBD_Methyl-HT-SELEX	0.961	0.979
DMRTC2 M04690_2.00	Homo sapiens	YGTATCGTTY	RAACGATACR	SELEX Yin et al.(2017) DMRTC2_FL_Methyl-HT-SELEX_1	0.961	0.979
DMRTC2 M04691_2.00	Homo sapiens	NRTGTRKCRAWW	WWTYGMYACAYN	SELEX Yin et al.(2017) DMRTC2_FL_Methyl-HT-SELEX_2	0.961	0.979
ENSMODG00000010059 M01932_2.00	Monodelphis domestica	NDWGTWDHNN	NNDHWACWHN	PBM Weirauch et al.(2014) pTH9215	0.950	0.915
ENSTTRG00000008270 M01934_2.00	Tursiops truncatus	NNNNRHNN	NNDYNNNN	PBM Weirauch et al.(2014) pTH9387	0.949	0.915
ENSOANG00000013938 M01933_2.00	Ornithorhynchus anatinus	NNWGTWDNNN	NNNHWACWNN	PBM Weirauch et al.(2014) pTH9271	0.934	0.809
dmrt93B M03718_2.00	Drosophila melanogaster	NDTGTATCRWW	WWYGATACAHN	SELEX Nitta et al.(2015) dmrt93B_1	0.901	0.660
dmrt93B M03719_2.00	Drosophila melanogaster	NNHGTAWCNNN	NNNGWTACDNN	SELEX Nitta et al.(2015) dmrt93B_2	0.901	0.660
DMRT3 M01927_2.00	Homo sapiens	NWTGTAWCMNN	NNKGWTACAWN	PBM Weirauch et al.(2014) pTH9188	0.894	0.681
DMRT3 M04681_2.00	Homo sapiens	AWTGTAWCAAWWH	DWWTTGWTACAWT	SELEX Yin et al.(2017) DMRT3_eDBD_HT-SELEX	0.894	0.681
DMRT3 M10430_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DMRT3_01	0.894	0.681
DMRT3 M04682_2.00	Homo sapiens	AATGTAWCRAWWY	RWWTYGWTACATT	SELEX Yin et al.(2017) DMRT3_eDBD_Methyl-HT-SELEX	0.894	0.681
dmd-5 M00659_2.00	Caenorhabditis elegans	WNWRTWDHNN	NNDHWAYWNW	PBM Narasimhan et al.(2015) pTH10777	0.880	0.681
Dmrt1 M09027_2.00	Mus musculus	HDGHWACAAWGTWDCHN	NDGHWACWTTGTWDCHD	Misc Kulakovskiy et al.(2013) DMRT1_MOUSE.H11MO.0.C	0.876	0.660
DMRT1 M01928_2.00	Homo sapiens	NDWGTWDCNN	NNGHWACWHN	PBM Weirauch et al.(2014) pTH9197	0.873	0.660
DMRT1 M01929_2.00	Homo sapiens	TGTATCAA	TTGATACA	PBM Weirauch et al.(2014) pTH9446	0.873	0.660
DMRT1 M04683_2.00	Homo sapiens	NWTGTWDCVWHN	NDWBGHWACAWN	SELEX Yin et al.(2017) DMRT1_FL_HT-SELEX	0.873	0.660
DMRT1 M10431_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DMRT1_01	0.873	0.660
DMRT1 M04684_2.00	Homo sapiens	NDYGTWDCVNNN	NNNBGHWACRHN	SELEX Yin et al.(2017) DMRT1_FL_Methyl-HT-SELEX	0.873	0.660
DMRTA2 M01930_2.00	Homo sapiens	NNHDTDDNNN	NNNHHAHDNN	PBM Weirauch et al.(2014) pTH9198	0.873	0.660
dmrt99B M01935_2.00	Drosophila melanogaster	WRTWDCNDNN	NNHNGHWAYW	PBM Weirauch et al.(2014) pTH9261	0.873	0.660
dmrt99B M01211_2.00	Drosophila melanogaster	NNHDTDDNNN	NNNHHAHDNN	PBM Lambert et al.(2019) pTH9799	0.873	0.660
dmrta2 M01937_2.00	Xenopus tropicalis	NNWDWDDN	NHHWHWNN	PBM Weirauch et al.(2014) pTH9300	0.873	0.660
dmrt99B M03720_2.00	Drosophila melanogaster	HNGHWACAATGTWDCND	HNGHWACATTGTWDCND	SELEX Nitta et al.(2015) dmrt99B_1	0.873	0.660
DMRTA2 M04692_2.00	Homo sapiens	VHTGTWDCVDHN	NDHBGHWACADB	SELEX Yin et al.(2017) DMRTA2_eDBD_HT-SELEX	0.873	0.660
DMRTA2 M10433_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DMRT5_01	0.873	0.660
DMRTA2 M04693_2.00	Homo sapiens	HHTGTWDCVNHN	NDNBGHWACADD	SELEX Yin et al.(2017) DMRTA2_eDBD_Methyl-HT-SELEX	0.873	0.660
DMRT2 M01931_2.00	Homo sapiens	NAATKTATHN	NDATAMATTN	PBM Weirauch et al.(2014) pTH9189	0.860	0.617
DMRT2 M10434_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DMRT2_01	0.860	0.617
dmd-4 M00656_2.00	Caenorhabditis elegans	NWGTAWCNNN	NNNGWTACWN	PBM Narasimhan et al.(2015) pTH10640	0.859	0.660
For this family, TFs with SR scores > 0.845* will likely have a similar motif*

Experimental Constructs

Motif ID	Domain	From	To	Sequence
M01926_2.00	DM	38	84	RSPTCARCRNHGITAHLKGHKRLCLFQACECHKCVLILERRRVMAAQ

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSCPOP00000001633	DM	38	84	RSPTCARCRNHGITAHLKGHKRLCLFQACECHKCVLILERRRVMAAQ

Links
Other DM family TFs
Other *Cavia porcellus* TFs

515 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AAEL018282	Aedes aegypti	AAEL018282	I
AATE018812	Anopheles atroparvus	AATE018812	I
ab	Drosophila yakuba	FBgn0235930	I
ab	Drosophila melanogaster	FBgn0264442	D
ab	Drosophila simulans	FBgn0195143	I
ACEP24751	Atta cephalotes	ACEP24751	I
ACOM030614	Anopheles coluzzii	ACOM030614	I
ACUA001087	Anopheles culicifacies	ACUA001087	I
ACYPI006271	Acyrthosiphon pisum	ACYPI006271	I
ADAC003462	Anopheles darlingi	ADAC003462	I
AFAF016946	Anopheles farauti	AFAF016946	I
AGAP028427	Anopheles gambiae	AGAP028427	I
AMAM000070	Anopheles maculatus	AMAM000070	I
AMEC007357	Anopheles melas	AMEC007357	I
AMEM014246	Anopheles merus	AMEM014246	I
ASIS011874	Anopheles sinensis	ASIS011874	I
ASTEI01793	Anopheles stephensi	ASTEI01793	I
CLEC025251	Cimex lectularius	CLEC025251	I
CPIJ008082	Culex quinquefasciatus	CPIJ008082	I
CpipJ_CPIJ008082	Culex pipiens	CpipJ_CPIJ008082	I
GA26004	Drosophila pseudoobscura	FBgn0247381	I
GB40130	Apis mellifera	GB40130	I
GG23712	Drosophila erecta	FBgn0115853	I
GH13387	Drosophila grimshawi	FBgn0120863	I
GI20650	Drosophila mojavensis	FBgn0143385	I
GJ13245	Drosophila virilis	FBgn0200471	I
GK14898	Drosophila willistoni	FBgn0216903	I
GL19550	Drosophila persimilis	FBgn0157148	I
GM18962	Drosophila sechellia	FBgn0173865	I
HHAL006659-PA	Halyomorpha halys	HHAL006659-PA	I
HMEL003953	Heliconius melpomene	HMEL003953	I
LCUP002091	Lucilia cuprina	LCUP002091	I
LDEC000284	Leptinotarsa decemlineata	LDEC000284	I
LLOJ000368	Lutzomyia longipalpis	LLOJ000368	I
MDOA005809	Musca domestica	MDOA005809	I
NV10623	Nasonia vitripennis	NV10623	I
PHUM144550	Pediculus humanus	PHUM144550	I
RPRC014038	Rhodnius prolixus	RPRC014038	I
SINV24839	Solenopsis invicta	SINV24839	I

DMRTC2 (Cavia porcellus) DM

TF Information

Directly determined binding motifs

Motifs from related TFs

Experimental Constructs

DNA Binding Domains

Links

515 Related TFs

DMRTC2 **(Cavia porcellus)**
DM