dmrta2 (Xenopus tropicalis)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 XB-GENE-997963 T169562_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dmrta2
M01937_2.00		 Xenopus tropicalis
NNWDWDDN
NHHWHWNN		 PBM
Weirauch et al.(2014)
pTH9300		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DMRTA2
M01930_2.00 		Homo sapiens
NNHDTDDNNN
NNNHHAHDNN		 PBM
Weirauch et al.(2014)
pTH9198 		0.965 0.979
DMRTA2
M04692_2.00 		Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX 		0.965 0.979
DMRTA2
M10433_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT5_01 		0.965 0.979
DMRTA2
M04693_2.00 		Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX 		0.965 0.979
dmrt99B
M01935_2.00 		Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW		 PBM
Weirauch et al.(2014)
pTH9261 		0.965 0.957
dmrt99B
M01211_2.00 		Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN		 PBM
Lambert et al.(2019)
pTH9799 		0.965 0.957
dmrt99B
M03720_2.00 		Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND		 SELEX
Nitta et al.(2015)
dmrt99B_1 		0.965 0.957
dmd-5
M00659_2.00 		Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW		 PBM
Narasimhan et al.(2015)
pTH10777 		0.956 0.936
Dmrt1
M09027_2.00 		Mus musculus
HDGHWACAAWGTWDCHN
NDGHWACWTTGTWDCHD		 Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C 		0.934 0.787
DMRT2
M01931_2.00 		Homo sapiens
NAATKTATHN
NDATAMATTN		 PBM
Weirauch et al.(2014)
pTH9189 		0.934 0.830
DMRT2
M10434_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT2_01 		0.934 0.830
DMRT1
M01928_2.00 		Homo sapiens
NDWGTWDCNN
NNGHWACWHN		 PBM
Weirauch et al.(2014)
pTH9197 		0.933 0.787
DMRT1
M01929_2.00 		Homo sapiens
TGTATCAA
TTGATACA		 PBM
Weirauch et al.(2014)
pTH9446 		0.933 0.787
DMRT1
M04683_2.00 		Homo sapiens
NWTGTWDCVWHN
NDWBGHWACAWN		 SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX 		0.933 0.787
DMRT1
M10431_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT1_01 		0.933 0.787
DMRT1
M04684_2.00 		Homo sapiens
NDYGTWDCVNNN
NNNBGHWACRHN		 SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX 		0.933 0.787
DMRT3
M01927_2.00 		Homo sapiens
NWTGTAWCMNN
NNKGWTACAWN		 PBM
Weirauch et al.(2014)
pTH9188 		0.932 0.851
DMRT3
M04681_2.00 		Homo sapiens
AWTGTAWCAAWWH
DWWTTGWTACAWT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX 		0.932 0.851
DMRT3
M10430_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT3_01 		0.932 0.851
DMRT3
M04682_2.00 		Homo sapiens
AATGTAWCRAWWY
RWWTYGWTACATT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX 		0.932 0.851
dmd-4
M00656_2.00 		Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN		 PBM
Narasimhan et al.(2015)
pTH10640 		0.930 0.787
dmrt93B
M03718_2.00 		Drosophila melanogaster
NDTGTATCRWW
WWYGATACAHN		 SELEX
Nitta et al.(2015)
dmrt93B_1 		0.900 0.702
dmrt93B
M03719_2.00 		Drosophila melanogaster
NNHGTAWCNNN
NNNGWTACDNN		 SELEX
Nitta et al.(2015)
dmrt93B_2 		0.900 0.702
Dmrtb1
M09028_2.00 		Mus musculus
DGHWACAMWGTWDCHV
BDGHWACWKTGTWDCH		 Misc
Kulakovskiy et al.(2013)
DMRTB_MOUSE.H11MO.0.C 		0.877 0.638
ENSMODG00000010059
M01932_2.00 		Monodelphis domestica
NDWGTWDHNN
NNDHWACWHN		 PBM
Weirauch et al.(2014)
pTH9215 		0.876 0.638
Dmrtc2
M00789_2.00 		Mus musculus
NNNATGTATHMNN
NNKDATACATNNN		 PBM
Weirauch et al.(2013)
pTH3205 		0.874 0.681
DMRTC2
M04685_2.00 		Homo sapiens
TGTAWCRTTB
VAAYGWTACA		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_1 		0.874 0.681
DMRTC2
M04686_2.00 		Homo sapiens
NWTGTADCAAWW
WWTTGHTACAWN		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_2 		0.874 0.681
DMRTC2
M04688_2.00 		Homo sapiens
TGTATCGTTC
GAACGATACA		 SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_1 		0.874 0.681
DMRTC2
M04689_2.00 		Homo sapiens
NDTGTRKCAAWH
DWTTGMYACAHN		 SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_2 		0.874 0.681
DMRTC2
M10432_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT7_01 		0.874 0.681
DMRTC2
M04687_2.00 		Homo sapiens
NATGTAKCRAWW
WWTYGMTACATN		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_Methyl-HT-SELEX 		0.874 0.681
DMRTC2
M04690_2.00 		Homo sapiens
YGTATCGTTY
RAACGATACR		 SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_1 		0.874 0.681
DMRTC2
M04691_2.00 		Homo sapiens
NRTGTRKCRAWW
WWTYGMYACAYN		 SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_2 		0.874 0.681
DMRTC2
M01926_2.00 		Cavia porcellus
NNHDWNDN
NHNWHDNN		 PBM
Weirauch et al.(2014)
pTH9250 		0.873 0.660
ENSOANG00000013938
M01933_2.00 		Ornithorhynchus anatinus
NNWGTWDNNN
NNNHWACWNN		 PBM
Weirauch et al.(2014)
pTH9271 		0.860 0.638
dsx
M06183_2.00 		Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA		 B1H
Zhu et al.(2011)
dsx-F_FlyReg_FBgn0000504 		0.859 0.638
dsx
M06184_2.00 		Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA		 B1H
Zhu et al.(2011)
dsx-M_FlyReg_FBgn0000504 		0.859 0.638
For this family, TFs with SR scores > 0.845 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01937_2.00 DM 31 77

DNA Binding Domains

Protein ID Domain From To Sequence
A4QNP7 DM 45 91
AAI36033 DM 45 91

Links

Other DM family TFs
Other Xenopus tropicalis TFs

654 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_03127 Capronia coronata A1O1_03127 I 0.000
A1O3_01960 Capronia epimyces A1O3_01960 I 0.000
A1O7_04357 Cladophialophora yegresii A1O7_04357 I 0.000
A1O9_00841 Exophiala aquamarina A1O9_00841 I 0.000
AB08549.1 Alternaria brassicicola AB08549.1 I 0.000
ACLA_085770 Aspergillus clavatus CADACLAG00007562 I 0.000
AGABI2DRAFT_198669 Agaricus bisporus AGABI2DRAFT_198669 I 0.000
AMAG_08745 Allomyces macrogynus AMAG_08745 N 0.000
AUEXF2481DRAFT_696292 Aureobasidium subglaciale AUEXF2481DRAFT_696292 I 0.000
BAUCODRAFT_43903 Baudoinia compniacensis BAUCODRAFT_43903 I 0.000
Bcin02g08650 Botrytis cinerea Bcin02g08650 I 0.000
BN7_2094 Wickerhamomyces ciferrii BN7_2094 I 0.000
BN946_scf184843.g9 Trametes cinnabarina BN946_scf184843.g9 I 0.000
CADANGAG00005174 Aspergillus niger CADANGAG00005174 I 0.000
CC1G_08281 Coprinopsis cinerea CC1G_08281 I 0.000
CCM_01336 Cordyceps militaris CCM_01336 N 0.000
CFIO01_05828 Colletotrichum fioriniae CFIO01_05828 I 0.000
CGGC5_7223 Colletotrichum gloeosporioides CGGC5_7223 I 0.000
CIMG_01739 Coccidioides immitis CIMG_01739 I 0.000
Cob_02770 Colletotrichum orbiculare Cob_02770 I 0.000
COCCADRAFT_103330 Bipolaris zeicola COCCADRAFT_103330 I 0.000
COCSADRAFT_113317 Bipolaris sorokiniana COCSADRAFT_113317 I 0.000
CPC735_047500 Coccidioides posadasii CPC735_047500 I 0.000
CPUR_03709 Claviceps purpurea CPUR_03709 N 0.000
CSUB01_09107 Colletotrichum sublineola CSUB01_09107 I 0.000
CTHT_0048700 Chaetomium thermophilum CTHT_0048700 I 0.000
CY34DRAFT_809035 Suillus luteus CY34DRAFT_809035 I 0.000
DACRYDRAFT_23137 Dacryopinax sp DACRYDRAFT_23137 I 0.000
DOTSEDRAFT_73261 Dothistroma septosporum DOTSEDRAFT_73261 I 0.000
DRE_02870 Drechslerella stenobrocha DRE_02870 I 0.000
E5Q_04392 Mixia osmundae E5Q_04392 I 0.000
EPUS_05314 Endocarpon pusillum EPUS_05314 I 0.000
estExt_fgenesh1_pg.C_60347 Sporobolomyces roseus estExt_fgenesh1_pg.C_60347 I 0.000
estExt_fgenesh1_pg.C_chr_60498 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_60498 I 0.000
estExt_Genewise1.C_120203 Mycosphaerella fijiensis estExt_Genewise1.C_120203 I 0.000
EURHEDRAFT_416859 Aspergillus ruber EURHEDRAFT_416859 I 0.000
e_gw1.42.11.1 Neurospora discreta e_gw1.42.11.1 I 0.000
fgenesh1_pg.00083_#_144 Aspergillus carbonarius fgenesh1_pg.00083_#_144 I 0.000
GALMADRAFT_118766 Galerina marginata GALMADRAFT_118766 I 0.000
GALMADRAFT_439138 Galerina marginata GALMADRAFT_439138 N 0.000
GALMADRAFT_709408 Galerina marginata GALMADRAFT_709408 N 0.000
GALMADRAFT_924624 Galerina marginata GALMADRAFT_924624 N 0.000
GLOINDRAFT_14063 Rhizophagus irregularis GLOINDRAFT_14063 I 0.000
GLOTRDRAFT_119791 Gloeophyllum trabeum GLOTRDRAFT_119791 I 0.000
GLRG_11373 Colletotrichum graminicola GLRG_11373 I 0.000
GMDG_07418 Pseudogymnoascus destructans GMDG_07418 I 0.000
gww2.5.554.1 Phanerochaete chrysosporium gww2.5.554.1 N 0.000
H072_552 Dactylellina haptotyla H072_552 I 0.000
H101_07691 Trichophyton interdigitale H101_07691 I 0.000
H102_08541 Trichophyton rubrum H102_08541 I 0.000
H105_08570 Trichophyton soudanense H105_08570 I 0.000
HCBG_02664 Histoplasma capsulatum HCBG_02664 I 0.000
HETIRDRAFT_380701 Heterobasidion irregulare HETIRDRAFT_380701 N 0.000
HMPREF1541_09317 Cyphellophora europaea HMPREF1541_09317 I 0.000
HYDPIDRAFT_100219 Hydnomerulius pinastri HYDPIDRAFT_100219 N 0.000
K443DRAFT_103561 Laccaria amethystina K443DRAFT_103561 N 0.000
LACBIDRAFT_300067 Laccaria bicolor LACBIDRAFT_300067 I 0.000
LEMA_P008300.1 Leptosphaeria maculans LEMA_P008300.1 I 0.000
M404DRAFT_143892 Pisolithus tinctorius M404DRAFT_143892 I 0.000
M404DRAFT_42467 Pisolithus tinctorius M404DRAFT_42467 I 0.000
M407DRAFT_88338 Tulasnella calospora M407DRAFT_88338 I 0.000
M408DRAFT_138020 Serendipita vermifera M408DRAFT_138020 I 0.000
M413DRAFT_446777 Hebeloma cylindrosporum M413DRAFT_446777 I 0.000
M422DRAFT_252354 Sphaerobolus stellatus M422DRAFT_252354 I 0.000
M437DRAFT_71705 Aureobasidium melanogenum M437DRAFT_71705 I 0.000
M438DRAFT_378068 Aureobasidium pullulans M438DRAFT_378068 I 0.000
MAPG_11530 Magnaporthe poae MAPG_11530 I 0.000
MBM_06818 Marssonina brunnea MBM_06818 I 0.000
MCYG_03255 Microsporum canis MCYG_03255 I 0.000
MELLADRAFT_78083 Melampsora laricipopulina MELLADRAFT_78083 N 0.000
MGYG_00413 Microsporum gypseum MGYG_00413 I 0.000
Moror_15941 Moniliophthora roreri Moror_15941 N 0.000
MPER_08472 Moniliophthora perniciosa MPER_08472 N 0.000
MPH_05091 Macrophomina phaseolina MPH_05091 I 0.000
MVLG_06765 Microbotryum violaceum MVLG_06765 I 0.000
MYCFIDRAFT_52047 Pseudocercospora fijiensis MYCFIDRAFT_52047 I 0.000
Mycgr3G109990 Zymoseptoria tritici Mycgr3G109990 I 0.000
NEUTE1DRAFT_67259 Neurospora tetrasperma NEUTE1DRAFT_67259 I 0.000
NFIA_058480 Neosartorya fischeri CADNFIAG00005507 I 0.000
OCS_06342 Ophiocordyceps sinensis OCS_06342 N 0.000
PAXRUDRAFT_831203 Paxillus rubicundulus PAXRUDRAFT_831203 I 0.000
Pc22g04440 Penicillium chrysogenum Pc22g04440 I 0.000
PCH_Pc22g04440 Penicillium rubens PCH_Pc22g04440 I 0.000
PDE_08232 Penicillium oxalicum PDE_08232 I 0.000
PDIP_43280 Penicillium digitatum PDIP_43280 I 0.000
PEX1_004250 Penicillium expansum PEX1_004250 I 0.000
PHACADRAFT_119777 Phanerochaete carnosa PHACADRAFT_119777 I 0.000
PHLGIDRAFT_123599 Phlebiopsis gigantea PHLGIDRAFT_123599 I 0.000
PITC_093690 Penicillium italicum PITC_093690 I 0.000
PLEOSDRAFT_1087686 Pleurotus ostreatus PLEOSDRAFT_1087686 I 0.000
PMAA_079170 Talaromyces marneffei PMAA_079170 I 0.000
PMAA_079170 Penicillium marneffei PMAA_079170 I 0.000
PTTG_01866 Puccinia triticina PTTG_01866 N 0.000
PTT_13287 Pyrenophora teres PTT_13287 I 0.000
PV04_04928 Capronia semiimmersa PV04_04928 I 0.000
PV05_09358 Exophiala xenobiotica PV05_09358 I 0.000
PV06_04293 Exophiala oligosperma PV06_04293 I 0.000
PV07_07635 Cladophialophora immunda PV07_07635 I 0.000
PV08_10336 Exophiala spinifera PV08_10336 I 0.000
PV09_03463 Verruconis gallopava PV09_03463 I 0.000
PV10_00024 Exophiala mesophila PV10_00024 I 0.000
PV11_04205 Exophiala sideris PV11_04205 I 0.000
PVAR5_3450 Byssochlamys spectabilis PVAR5_3450 I 0.000
RHTO_03255 Rhodosporidium toruloides RHTO_03255 I 0.000
rrg-2 Neurospora crassa NCU02413 I 0.000
SBOR_2785 Sclerotinia borealis SBOR_2785 I 0.000
SCHCODRAFT_65208 Schizophyllum commune SCHCODRAFT_65208 I 0.000
SEPMUDRAFT_149100 Sphaerulina musiva SEPMUDRAFT_149100 I 0.000
TESG_01010 Trichophyton tonsurans TESG_01010 I 0.000
THITE_2116663 Thielavia terrestris THITE_2116663 I 0.000
TSTA_113620 Talaromyces stipitatus TSTA_113620 I 0.000
U727_00434140231 Penicillium solitum U727_00434140231 I 0.000
UCREL1_2186 Eutypa lata UCREL1_2186 I 0.000
UCRNP2_5191 Neofusicoccum parvum UCRNP2_5191 I 0.000
UCRPA7_1917 Togninia minima UCRPA7_1917 I 0.000
UREG_05447 Uncinocarpus reesii UREG_05447 I 0.000
V499_02747 Pseudogymnoascus pannorum V499_02747 I 0.000
V565_131540 Rhizoctonia solani V565_131540 I 0.000
VDBG_03345 Verticillium albo atrum VDBG_03345 I 0.000
VDBG_03345 Verticillium alfalfae VDBG_03345 I 0.000
VHEMI07665 Torrubiella hemipterigena VHEMI07665 N 0.000
W97_07443 Coniosporium apollinis W97_07443 I 0.000
X797_001019 Metarhizium robertsii X797_001019 I 0.000
Z517_12098 Fonsecaea pedrosoi Z517_12098 I 0.000
Z518_09830 Rhinocladiella mackenziei Z518_09830 I 0.000