DME_0000735001 (Dracunculus medinensis)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 DME_0000735001 T169768_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dmd-4
M00656_2.00 		Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN		 PBM
Narasimhan et al.(2015)
pTH10640 		0.957 0.872
DMRT3
M01927_2.00 		Homo sapiens
NWTGTAWCMNN
NNKGWTACAWN		 PBM
Weirauch et al.(2014)
pTH9188 		0.946 0.809
DMRT3
M04681_2.00 		Homo sapiens
AWTGTAWCAAWWH
DWWTTGWTACAWT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX 		0.946 0.809
DMRT3
M10430_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT3_01 		0.946 0.809
DMRT3
M04682_2.00 		Homo sapiens
AATGTAWCRAWWY
RWWTYGWTACATT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX 		0.946 0.809
DMRTA2
M01930_2.00 		Homo sapiens
NNHDTDDNNN
NNNHHAHDNN		 PBM
Weirauch et al.(2014)
pTH9198 		0.935 0.787
dmrta2
M01937_2.00 		Xenopus tropicalis
NNWDWDDN
NHHWHWNN		 PBM
Weirauch et al.(2014)
pTH9300 		0.935 0.787
DMRTA2
M04692_2.00 		Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX 		0.935 0.787
DMRTA2
M10433_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT5_01 		0.935 0.787
DMRTA2
M04693_2.00 		Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX 		0.935 0.787
dmrt99B
M01935_2.00 		Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW		 PBM
Weirauch et al.(2014)
pTH9261 		0.935 0.766
dmrt99B
M01211_2.00 		Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN		 PBM
Lambert et al.(2019)
pTH9799 		0.935 0.766
dmrt99B
M03720_2.00 		Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND		 SELEX
Nitta et al.(2015)
dmrt99B_1 		0.935 0.766
dmd-5
M00659_2.00 		Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW		 PBM
Narasimhan et al.(2015)
pTH10777 		0.927 0.766
DMRT1
M01928_2.00 		Homo sapiens
NDWGTWDCNN
NNGHWACWHN		 PBM
Weirauch et al.(2014)
pTH9197 		0.924 0.745
DMRT1
M01929_2.00 		Homo sapiens
TGTATCAA
TTGATACA		 PBM
Weirauch et al.(2014)
pTH9446 		0.924 0.745
DMRT1
M04683_2.00 		Homo sapiens
NWTGTWDCVWHN
NDWBGHWACAWN		 SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX 		0.924 0.745
DMRT1
M10431_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT1_01 		0.924 0.745
DMRT1
M04684_2.00 		Homo sapiens
NDYGTWDCVNNN
NNNBGHWACRHN		 SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX 		0.924 0.745
Dmrt1
M09027_2.00 		Mus musculus
HDGHWACAAWGTWDCHN
NDGHWACWTTGTWDCHD		 Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C 		0.916 0.723
DMRT2
M01931_2.00 		Homo sapiens
NAATKTATHN
NDATAMATTN		 PBM
Weirauch et al.(2014)
pTH9189 		0.899 0.681
DMRT2
M10434_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT2_01 		0.899 0.681
dmrt93B
M03718_2.00 		Drosophila melanogaster
NDTGTATCRWW
WWYGATACAHN		 SELEX
Nitta et al.(2015)
dmrt93B_1 		0.892 0.723
dmrt93B
M03719_2.00 		Drosophila melanogaster
NNHGTAWCNNN
NNNGWTACDNN		 SELEX
Nitta et al.(2015)
dmrt93B_2 		0.892 0.723
DMRTC2
M01926_2.00 		Cavia porcellus
NNHDWNDN
NHNWHDNN		 PBM
Weirauch et al.(2014)
pTH9250 		0.876 0.660
Dmrtc2
M00789_2.00 		Mus musculus
NNNATGTATHMNN
NNKDATACATNNN		 PBM
Weirauch et al.(2013)
pTH3205 		0.874 0.660
DMRTC2
M04685_2.00 		Homo sapiens
TGTAWCRTTB
VAAYGWTACA		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_1 		0.874 0.660
DMRTC2
M04686_2.00 		Homo sapiens
NWTGTADCAAWW
WWTTGHTACAWN		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_HT-SELEX_2 		0.874 0.660
DMRTC2
M04688_2.00 		Homo sapiens
TGTATCGTTC
GAACGATACA		 SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_1 		0.874 0.660
DMRTC2
M04689_2.00 		Homo sapiens
NDTGTRKCAAWH
DWTTGMYACAHN		 SELEX
Yin et al.(2017)
DMRTC2_FL_HT-SELEX_2 		0.874 0.660
DMRTC2
M10432_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT7_01 		0.874 0.660
DMRTC2
M04687_2.00 		Homo sapiens
NATGTAKCRAWW
WWTYGMTACATN		 SELEX
Yin et al.(2017)
DMRTC2_eDBD_Methyl-HT-SELEX 		0.874 0.660
DMRTC2
M04690_2.00 		Homo sapiens
YGTATCGTTY
RAACGATACR		 SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_1 		0.874 0.660
DMRTC2
M04691_2.00 		Homo sapiens
NRTGTRKCRAWW
WWTYGMYACAYN		 SELEX
Yin et al.(2017)
DMRTC2_FL_Methyl-HT-SELEX_2 		0.874 0.660
ENSOANG00000013938
M01933_2.00 		Ornithorhynchus anatinus
NNWGTWDNNN
NNNHWACWNN		 PBM
Weirauch et al.(2014)
pTH9271 		0.872 0.660
ENSMODG00000010059
M01932_2.00 		Monodelphis domestica
NDWGTWDHNN
NNDHWACWHN		 PBM
Weirauch et al.(2014)
pTH9215 		0.870 0.660
dsx
M06183_2.00 		Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA		 B1H
Zhu et al.(2011)
dsx-F_FlyReg_FBgn0000504 		0.862 0.681
dsx
M06184_2.00 		Drosophila melanogaster
TDRYVACWTWGYAG
CTRCWAWGTBRYHA		 B1H
Zhu et al.(2011)
dsx-M_FlyReg_FBgn0000504 		0.862 0.681
For this family, TFs with SR scores > 0.845 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
DME_0000735001-mRNA-1 DM 18 64

Links

Other DM family TFs
Other Dracunculus medinensis TFs

607 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G21230 Arabidopsis thaliana AT2G21230 D
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Bo4g145800 Brassica oleracea Bo4g145800 I
Bostr.24513s0082 Boechera stricta Bostr.24513s0082 I
Bostr.5022s0114 Boechera stricta Bostr.5022s0114 I
Bra030314 Brassica rapa Bra030314 I
Cagra.2961s0025 Capsella grandiflora Cagra.2961s0025 I
Cagra.6952s0017 Capsella grandiflora Cagra.6952s0017 I
Carubv10023063m.g Capsella rubella Carubv10023063m.g I
Ca_26452 Cicer arietinum Ca_26452 I
fgenesh2_kg.4__1126__AT2G31370.4 Arabidopsis lyrata fgenesh2_kg.4__1126__AT2G31370.4 I
fgenesh2_kg.4__38__AT2G21230.1 Arabidopsis lyrata fgenesh2_kg.4__38__AT2G21230.1 I
GSMUA_Achr11G03050_001 Musa acuminata GSMUA_Achr11G03050_001 I
mgf012126m Mimulus guttatus mgf012126m I
mgf013572m Mimulus guttatus mgf013572m I
MTR_6g034945 Medicago truncatula MTR_6g034945 I
OSTLU_27099 Ostreococcus lucimarinus OSTLU_27099 N
PDK_20s1584971g001 Phoenix dactylifera PDK_20s1584971g001 I
PGSC0003DMG401003720 Solanum tuberosum PGSC0003DMG401003720 I
POSF21 Arabidopsis thaliana AT2G31370 I
Solyc04g081190.2 Solanum lycopersicum Solyc04g081190.2 I
Solyc06g049040.2 Solanum lycopersicum Solyc06g049040.2 N
Thhalv10000129m.g Eutrema salsugineum Thhalv10000129m.g I
Thhalv10016790m.g Eutrema salsugineum Thhalv10016790m.g I