TRE_0001691701 (Trichobilharzia regenti)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 TRE_0001691701 T170108_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DMRT2
M01931_2.00 		Homo sapiens
NAATKTATHN
NDATAMATTN		 PBM
Weirauch et al.(2014)
pTH9189 		0.917 0.787
DMRT2
M10434_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT2_01 		0.917 0.787
DMRTA2
M01930_2.00 		Homo sapiens
NNHDTDDNNN
NNNHHAHDNN		 PBM
Weirauch et al.(2014)
pTH9198 		0.913 0.745
dmrta2
M01937_2.00 		Xenopus tropicalis
NNWDWDDN
NHHWHWNN		 PBM
Weirauch et al.(2014)
pTH9300 		0.913 0.745
DMRTA2
M04692_2.00 		Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX 		0.913 0.745
DMRTA2
M10433_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT5_01 		0.913 0.745
DMRTA2
M04693_2.00 		Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD		 SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX 		0.913 0.745
dmrt99B
M01935_2.00 		Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW		 PBM
Weirauch et al.(2014)
pTH9261 		0.913 0.723
dmrt99B
M01211_2.00 		Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN		 PBM
Lambert et al.(2019)
pTH9799 		0.913 0.723
dmrt99B
M03720_2.00 		Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND		 SELEX
Nitta et al.(2015)
dmrt99B_1 		0.913 0.723
DMRT3
M01927_2.00 		Homo sapiens
NWTGTAWCMNN
NNKGWTACAWN		 PBM
Weirauch et al.(2014)
pTH9188 		0.899 0.702
DMRT3
M04681_2.00 		Homo sapiens
AWTGTAWCAAWWH
DWWTTGWTACAWT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX 		0.899 0.702
DMRT3
M10430_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT3_01 		0.899 0.702
DMRT3
M04682_2.00 		Homo sapiens
AATGTAWCRAWWY
RWWTYGWTACATT		 SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX 		0.899 0.702
dmd-4
M00656_2.00 		Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN		 PBM
Narasimhan et al.(2015)
pTH10640 		0.894 0.681
dmd-5
M00659_2.00 		Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW		 PBM
Narasimhan et al.(2015)
pTH10777 		0.891 0.702
Dmrt1
M09027_2.00 		Mus musculus
HDGHWACAAWGTWDCHN
NDGHWACWTTGTWDCHD		 Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C 		0.865 0.660
DMRT1
M01928_2.00 		Homo sapiens
NDWGTWDCNN
NNGHWACWHN		 PBM
Weirauch et al.(2014)
pTH9197 		0.862 0.660
DMRT1
M01929_2.00 		Homo sapiens
TGTATCAA
TTGATACA		 PBM
Weirauch et al.(2014)
pTH9446 		0.862 0.660
DMRT1
M04683_2.00 		Homo sapiens
NWTGTWDCVWHN
NDWBGHWACAWN		 SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX 		0.862 0.660
DMRT1
M10431_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DMRT1_01 		0.862 0.660
DMRT1
M04684_2.00 		Homo sapiens
NDYGTWDCVNNN
NNNBGHWACRHN		 SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX 		0.862 0.660
Dmrtb1
M09028_2.00 		Mus musculus
DGHWACAMWGTWDCHV
BDGHWACWKTGTWDCH		 Misc
Kulakovskiy et al.(2013)
DMRTB_MOUSE.H11MO.0.C 		0.861 0.596
dmrt93B
M03718_2.00 		Drosophila melanogaster
NDTGTATCRWW
WWYGATACAHN		 SELEX
Nitta et al.(2015)
dmrt93B_1 		0.855 0.723
dmrt93B
M03719_2.00 		Drosophila melanogaster
NNHGTAWCNNN
NNNGWTACDNN		 SELEX
Nitta et al.(2015)
dmrt93B_2 		0.855 0.723
For this family, TFs with SR scores > 0.845 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0001691701-mRNA-1 DM 62 108

Links

Other DM family TFs
Other Trichobilharzia regenti TFs

532 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R004000 Aptenodytes forsteri Afo_R004000 N
Alligator_sinensis_CCG004396.1 Alligator sinensis Alligator_sinensis_CCG004396.1 N
Brh_R011240 Buceros rhinoceros Brh_R011240 N
Cmyd_10004225 Chelonia mydas Cmyd_10004225 N
ENSAMEG00000017562 Ailuropoda melanoleuca ENSAMEG00000017562 N
ENSAPLG00000007731 Anas platyrhynchos ENSAPLG00000007731 N
ENSCSAG00000013610 Chlorocebus sabaeus ENSCSAG00000013610 N
ENSFALG00000002807 Ficedula albicollis ENSFALG00000002807 N
ENSGALG00000002305 Gallus gallus ENSGALG00000002305 N
ENSGMOG00000002344 Gadus morhua ENSGMOG00000002344 N
ENSNLEG00000018056 Nomascus leucogenys ENSNLEG00000018056 N
ENSOARG00000015070 Ovis aries ENSOARG00000015070 N
ENSONIG00000010729 Oreochromis niloticus ENSONIG00000010729 N
ENSP00000356375-D1 Bos grunniens ENSP00000356375-D1 N
ENSPFOG00000006537 Poecilia formosa ENSPFOG00000006537 N
ENSPPYG00000000388 Pongo abelii ENSPPYG00000000388 N
ENSXMAG00000004794 Xiphophorus maculatus ENSXMAG00000004794 N
Gfo_R006641 Geospiza fortis Gfo_R006641 N
Myotis_brandtii_ZBTB41_10008236 Myotis brandtii Myotis_brandtii_ZBTB41_10008236 N
Tal_R010443 Tyto alba Tal_R010443 N
zbtb41 Takifugu rubripes ENSTRUG00000009203 N
zbtb41 Tetraodon nigroviridis ENSTNIG00000007805 N
ZBTB41 Tursiops truncatus ENSTTRG00000008689 N
ZBTB41 Vicugna pacos ENSVPAG00000006551 N
zbtb41 Xenopus tropicalis XB-GENE-877334 N
ZBTB41 Anolis carolinensis ENSACAG00000009459 N
ZBTB41 Taeniopygia guttata ENSTGUG00000004282 N
Zbtb41 Rattus norvegicus ENSRNOG00000011137 N
ZBTB41 Pan troglodytes ENSPTRG00000001808 N
ZBTB41 Otolemur garnettii ENSOGAG00000012893 N
ZBTB41 Oryctolagus cuniculus ENSOCUG00000014765 N
Zbtb41 Mus musculus ENSMUSG00000033964 N
ZBTB41 Monodelphis domestica ENSMODG00000012684 N
ZBTB41 Myotis lucifugus ENSMLUG00000016964 N
ZBTB41 Loxodonta africana ENSLAFG00000012902 N
ZBTB41 Gorilla gorilla ENSGGOG00000004843 N
zbtb41 Gasterosteus aculeatus ENSGACG00000016102 N
ZBTB41 Homo sapiens ENSG00000177888 N
ZBTB41 Callithrix jacchus ENSCJAG00000004794 N
ZBTB41 Canis familiaris ENSCAFG00000011381 N
ZBTB41 Bos taurus ENSBTAG00000002291 N