CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_220220
(
Physcomitrella patens
)
Dof
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02701 (zf-Dof)
IPR003851
estExt_fgenesh1_pg.C_220220
T171533_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_220220
Dof
217
266
IPKECPRCNSKEVKFKYFNNKKLNQPRYQCLSCKDFFTHGGKKLATEAAS
estExt_fgenesh1_pg.C_220220
Dof
308
352
MEKLCRKCGSKNTAFKYLNNGQLDQPRYKCLDCKGMFQLHNKRVR
estExt_fgenesh1_pg.C_220220
Dof
412
466
VVKPCPSCKKTKTRFKYFNNKNMKQPRYECLDCHQYFTYKTEFNQVNSGAFGGDQ
Links
Other
Dof
family TFs
Other
Physcomitrella patens
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSHAG00000015482
Sarcophilus harrisii
ENSSHAG00000015482
N
PRDM14
Myotis lucifugus
ENSMLUG00000007615
N
PRDM14
Otolemur garnettii
ENSOGAG00000013208
N
Smp_138420.2
Schistosoma mansoni
Smp_138420.2
N
SMTD_0000750901
Schistosoma mattheei
SMTD_0000750901
N