CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G148506
(
Zea mays
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
GRMZM2G148506
T173154_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
efl-2
M01966_2.00
Caenorhabditis elegans
NDBGCGSBNN
NNVSCGCVHN
PBM
Weirauch et al.(2014)
pTH5916
0.431
0.431
efl-2
M00662_2.00
Caenorhabditis elegans
NSGCGSNNDN
NHNNSCGCSN
PBM
Narasimhan et al.(2015)
pTH9173
0.431
0.431
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G148506_P01
E2F
137
187
LLKTELTSFMVLYNRDNVESIGLDEAAKCLGVERRRIYDIVNVLEGVGHVA
GRMZM2G148506_P02
E2F
136
194
VYLSKQIFMVLYNRDNVESIGLDEAAKCLGVERRRIYDIVNVLEGVGIQQEDIVAFYWS
Links
Other
E2F
family TFs
Other
Zea mays
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R013725
Calypte anna
Aan_R013725
I
0.459
Afo_R001855
Aptenodytes forsteri
Afo_R001855
I
0.459
E2F5
Sorex araneus
ENSSARG00000012960
I
0.429
efl-2
Caenorhabditis elegans
WBGene00001162
D
0.431
ENSAPLG00000005664
Anas platyrhynchos
ENSAPLG00000005664
I
0.459
ENSCPOG00000026476
Cavia porcellus
ENSCPOG00000026476
I
0.469
ENSMEUG00000012534
Macropus eugenii
ENSMEUG00000012534
I
0.459
ENSPMAG00000000488
Petromyzon marinus
ENSPMAG00000000488
I
0.459
ENSSHAG00000011293
Sarcophilus harrisii
ENSSHAG00000011293
I
0.459
GH13220
Drosophila grimshawi
FBgn0120697
I
0.471
GRMZM2G001699
Zea mays
GRMZM2G001699
N
0.941
GRMZM2G169709
Zea mays
GRMZM2G169709
I
0.980
GSPATT00023028001
Paramecium tetraurelia
GSPATT00023028001
I
0.431
ISCW000457
Ixodes scapularis
ISCW000457
I
0.432
MLOC_67050
Hordeum vulgare
MLOC_67050
I
0.517
NEMVEDRAFT_v1g137233
Nematostella vectensis
NEMVEDRAFT_v1g137233
I
0.448
orange1.1g045382m.g
Citrus sinensis
orange1.1g045382m.g
I
0.552
Pavir.J27276
Panicum virgatum
Pavir.J27276
N
0.575
Pavir.J32284
Panicum virgatum
Pavir.J32284
I
0.534
PK04229.1
Cannabis sativa
PK04229.1
N
0.542
Tal_R001534
Tyto alba
Tal_R001534
I
0.459