Gfo_R005557 (Geospiza fortis)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 Gfo_R005557 T173732_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFDP1
M08108_2.00 		Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA1122.1 		1.000 1.000
TFDP1
M09035_2.00 		Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB		 Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C 		1.000 1.000
dpl-1
M09525_2.00 		Caenorhabditis elegans
GCGCGYHW
WDRCGCGC		 Misc
Heinz et al.(2010)
cElegans-Adult_modEncode 		0.765 0.765
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R005557 E2F 109 190

Links

Other E2F family TFs
Other Geospiza fortis TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB06533.1 Alternaria brassicicola AB06533.1 N 0.000
AUEXF2481DRAFT_374368 Aureobasidium subglaciale AUEXF2481DRAFT_374368 I 0.000
CHGG_07364 Chaetomium globosum CHGG_07364 I 0.000
COCC4DRAFT_46985 Bipolaris maydis COCC4DRAFT_46985 N 0.000
COCMIDRAFT_8999 Bipolaris oryzae COCMIDRAFT_8999 N 0.000
COCSADRAFT_25239 Bipolaris sorokiniana COCSADRAFT_25239 N 0.000
COCVIDRAFT_37014 Bipolaris victoriae COCVIDRAFT_37014 N 0.000
DOTSEDRAFT_68376 Dothistroma septosporum DOTSEDRAFT_68376 I 0.000
estExt_fgenesh1_pg.C_40234 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_40234 N 0.000
estExt_fgenesh1_pg.C_chr_10960 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10960 I 0.000
estExt_Genewise1.C_12176 Mycosphaerella fijiensis estExt_Genewise1.C_12176 I 0.000
GMDG_01905 Pseudogymnoascus destructans GMDG_01905 I 0.000
LEMA_P115290.1 Leptosphaeria maculans LEMA_P115290.1 N 0.000
M437DRAFT_67933 Aureobasidium melanogenum M437DRAFT_67933 I 0.000
M438DRAFT_155623 Aureobasidium pullulans M438DRAFT_155623 I 0.000
MPH_08875 Macrophomina phaseolina MPH_08875 N 0.000
MYCFIDRAFT_127068 Pseudocercospora fijiensis MYCFIDRAFT_127068 I 0.000
Mycgr3G107320 Zymoseptoria tritici Mycgr3G107320 I 0.000
MYCTH_2301920 Myceliophthora thermophila MYCTH_2301920 I 0.000
PODANS_2_4060 Podospora anserina PODANS_2_4060 I 0.000
PTT_02079 Pyrenophora teres PTT_02079 N 0.000
PV09_00811 Verruconis gallopava PV09_00811 N 0.000
SEPMUDRAFT_146091 Sphaerulina musiva SEPMUDRAFT_146091 I 0.000
SETTUDRAFT_174289 Setosphaeria turcica SETTUDRAFT_174289 N 0.000
THITE_2108095 Thielavia terrestris THITE_2108095 I 0.000
UCRNP2_458 Neofusicoccum parvum UCRNP2_458 N 0.000
V499_05963 Pseudogymnoascus pannorum V499_05963 I 0.000