fgenesh2_pg.C_Chr_02000142 (Micromonas sp RCC299)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 fgenesh2_pg.C_Chr_02000142 T173935_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFDP1
M08108_2.00 		Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA1122.1 		0.868 0.868
TFDP1
M09035_2.00 		Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB		 Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C 		0.868 0.868
dpl-1
M09525_2.00 		Caenorhabditis elegans
GCGCGYHW
WDRCGCGC		 Misc
Heinz et al.(2010)
cElegans-Adult_modEncode 		0.750 0.750
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
98766 E2F 186 267

Links

Other E2F family TFs
Other Micromonas sp RCC299 TFs

584 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB01972.1 Alternaria brassicicola AB01972.1 N
COCC4DRAFT_40530 Bipolaris maydis COCC4DRAFT_40530 N
COCCADRAFT_33634 Bipolaris zeicola COCCADRAFT_33634 N
COCMIDRAFT_90923 Bipolaris oryzae COCMIDRAFT_90923 N
COCVIDRAFT_89091 Bipolaris victoriae COCVIDRAFT_89091 N
gw1.5.192.1 Cochliobolus heterostrophus C5 gw1.5.192.1 N
LEMA_P076640.1 Leptosphaeria maculans LEMA_P076640.1 N
PTRG_08451 Pyrenophora triticirepentis PTRG_08451 N
PTT_15366 Pyrenophora teres PTT_15366 N
SETTUDRAFT_173493 Setosphaeria turcica SETTUDRAFT_173493 N
SNOG_02532 Stagonospora nodorum SNOG_02532 N